SimpleSearch - Line and FST details


Line specific information

 
Line ID 915D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N487790)
Segregation Analysis 50:40:33
Confirmed for Hit At2g42380
Parent of DUPLO pair 940
Parent of pair(s) none

Gene hit At2g36530

 
Sequence (A. th genome BLAST matches underlined) 
>76-K031461-022-915-D10-8409
TTATTACTTTTTCGCAGATGGATCGCTGTGAACTAACATGTATTACATGTTTATGGCTTA
ACCATCTTGTTCTCATATGTTTTTCCAGTCTGTGATTAAGAAGAAGTATGGGATCCTCCC
TATAGTGAGACATATTAGTCTTCGGCTCTTAAAAGGTTCGATTCCAAATTCTTCATTGTT
CAACTTAATTTTGTTGATTCAAAGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CT027154 [GenBank]
Graphic View Graphic view of gene At2g36530
Predicted Position of Insertion Chr2:15322357 - go to primer design
BLAST e Value 9e-47
Hit Clone Code (BAC ID) F1O11
Hit Gene Code At2g36530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Enolase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g42380

 
Sequence (A. th genome BLAST matches underlined) 
>76-K114403-0022-915-D10-8409
CATTTGGACGTGAGGTACTACGTCGAAAAAAGATTTCCGAATTAGAATAATTTGTTTATT
GCTTTCGCCTATAAATACGACGGATCGTAATTTGTCGTTTTATCAAAATGTACTTTCATT
TTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAATAGATGGATCTTGATC
CAAAAGATTACCAAAGAAAGCAAATCTGAATTTACAGGATTGAGGAAGGAAAAAAAAAAA
CCTTTATTTAAAAATTACAAAAAAACCTACGGTAATCCCATTTCAAAAAACAAAAAACCT
ACCCGGCCGGGCCCAAAA
GenBank Accession HE665872 [GenBank]
Graphic View Graphic view of gene At2g42380
Predicted Position of Insertion Chr2:17648530 - go to primer design
BLAST e Value 2e-28
Hit Clone Code (BAC ID) MHK10
Hit Gene Code At2g42380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Basic-leucine zipper (bZIP) transcription factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37