SimpleSearch - Line and FST details
Line specific information
| Line ID | 934B11 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2182, 7188, 7197, 9147 |
| Note |
Gene hit At5g60690
| Sequence (A. th genome BLAST matches underlined) | >82-K032035-022-934-B11-8409 TAAATTAATAATCATAAAGCGTATATTTGAAAACTAATTTTATGTGAAACTTTTCTGCCA GCCATAGGTGCAACTCTTTTAGAGTATGGGATCCTCCCTATAGAGAGACGCATGGATCAC TTTACGTAACTTCTACCACATAGGTGTATGATCATGCTACCCTAATAGAAATTATAGTTC ACAAATAAGTGTATGGGATCCTCCCTATAGTGAGACGTATTGACCAGCTTGGTTCGCAAA CATGAACACTGGCTGTGGCTGCAACATATCCAGACCATATTATACGTCTAAAACTACAGG TGTATTCTGCTTTTTGTTTGGTGTAGGACACATACCTTTAATGAGCAACACAGGATGGCA TCTTGGTGATCCCATAGAAGTTTTAGTATGGGATCCTCCCTATAGTGAGACGTATTGGTC ATTC |
| GenBank Accession | CT955112 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:24401775 - go to primer design |
| BLAST e Value | 1e-89 |
| Hit Clone Code (BAC ID) | MUP24 |
| Hit Gene Code | At5g60690 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit MXE2
| Sequence (A. th genome BLAST matches underlined) | >82-K031923-022-934-B11-8409 CTTACACTGATAGTTTAACCGAAGGCGGGAAACGACAATCTGATCCCCGGGTATGGGATC CTCCCTATAGTGAGAGCNATTNNTCTTTTATTATTTTTATCAAACTTATTAATTTATCAA GTATTAATTTATGTAATTTCTACTATATAANTGTATAATCATGCAACCATAAAAGAAATT ATAATTCACAAATAAATGTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | CT955111 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:11078124 - go to primer design |
| BLAST e Value | 3e-24 |
| Hit Clone Code (BAC ID) | MXE2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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