SimpleSearch - Line and FST details
Line specific information
| Line ID | 934D06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N489610) |
| Segregation Analysis | 50:50:49 |
| Confirmed for Hit | At4g36690 |
| Parent of DUPLO pair | 12140 |
| Parent of pair(s) | none |
Gene hit At4g36690
| Sequence (A. th genome BLAST matches underlined) | >44-K031923-022-934-D06-8409 ATTGAGACCTATCAATAAGGTCTANTTTGCTTATATATCTTCTACTAATATCTTGTTTTT ATTTTCCCTCATCAGGAAAAAAAAATTTTAGACTCTGTTTTTTTTTTTTTGTCAAGAAAG GGTCCCCCCCCCTCTTAAAACCCAAAGACTTTCCAACCTTTCAACCCAAAAAAAAAAAAT ATTTATGAGTGTGTTTTTTTTCTTAAATTACACAAAATTTCTCAAGTTTTAACCAAATTT CGCTTACCATTATAAAAACCTTCCTGTCTCTGACATTTTTTTTTTCTCCATAAACAACTT CAGCTCCAAACTGATCCTAACCACCCTCTTATTTCAGATGTTCCAAAGTGTTTGCCGGTG CAAAATTTTTTTTCCTGCCCCTCTAGCCATTTTAAAACCCTTTTTCCCTCTTTTAGTCGG GTACCCCCCCATATTCAGGTTAGGTCTCAACACGTTTTGCCAGCTCATTTTGTTTTCTTC CCACATTATTATGAACACGACACTTTACCTGAAAATCTATTTGCTGCTGTGCATGGAATA AATACGATTCTCTTGTTCAGGCTTTTGTACCATTGTTCCCTGGTTGACACTCTCTCCACT GTAAGAAACTTACCTCCCATCTTGATCCTCGTATATGTCCGCCTACCCCAAATCTCTTAA TATAATCATCCTCGGTTTTGATCCCTCCCAATTGTGAGAGCTCCCCTACCTCACCTCACA CTCCACCTATCTCTCACTCTTGTCATGCTTACTTATTATCCTCATTCTCTTAATTTTCTC ATGCCTCCCCGTGTTTTTATAATATTTTATTCTCACTTTACTTCACGAATTAGTTTCATA TCTATCAAACGCGCTTTGCCCAAATCTCTAATCTGTCATTTCACCATTTTATCATATCTG ATGTTTACCACTATACTCTCATCTCGACTTCATCTCGCCTAAATTCTATTCTATATTGCT TTTATAATATTCCTTATATTCTCTCAATTTTTTAATTCCTCATCTTGTCCTTCCATCTTA ACTTGACCAATTATAAACCGCTTCTCTCTCATATCTACTCTTACGGTCTACCCCTTCTCT GTCCTTGAAAGTTTATACCTTTTGAA |
| GenBank Accession | CT955126 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:17294388 - go to primer design |
| BLAST e Value | 4e-42 |
| Hit Clone Code (BAC ID) | AP22 |
| Hit Gene Code | At4g36690 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | U2 snRNP auxilliary factor, large subunit, splicing factor |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K16L22
| Sequence (A. th genome BLAST matches underlined) | >44-K032035-022-934-D06-8409 GCCACTAAACTTAACGAACATATATAAGCCTTTTCCTGAAGTAAATAGGTATAATTTGCT TATCTATATTCTACTAATATCTTGTTTTTATTTTCCCTCATCAGAAAGAAAAAATTTAAG ACTCTGTTTTTTTTTTTTTGGGAAGAAAAGTAGACGCCCATCTCTTTAAAAAGGAAAAAT ATTAAACCTTTTAACCAAAAAAAAAAAGATTTAGATGAGGGGGTTTTTAATCATAGAAAA CCAAAAAATTCGAGGGCGCAAAAAAAATTTCGCGAACAAAAAAAAAAAACTTCCGGTATT CTGAAGTTTTTTTTTTTTCCAAAAAAAATTTCGGCGCAAAGAGGAAAAAGAGCACCAAAT TGATTCAGAGGCTCCAAAAATAACCCAAGGGGAAAATTTTGTTTCCTCCCCCTATACAAA ATATAAAACCCTCTTTCAAACAAATAATCGGGAAACCCCCCAATATTGGAGTTAGATCTC ACCACGTTTTGCAAAATCATTTTGATTACATCCAATATTATTAAGAAGAAAAGAAATT |
| GenBank Accession | CT955127 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:16771958 - go to primer design |
| BLAST e Value | 2e-38 |
| Hit Clone Code (BAC ID) | K16L22 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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