SimpleSearch - Line and FST details


Line specific information

 
Line ID 938B12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 7526, 8635, 8640, 10261, 76852, 76856, 76863

Gene hit At5g47560

 
Sequence (A. th genome BLAST matches underlined) 
>90-K112795-0022-938-B12-8409
AAACATCAGTGCATGGATTTATAACGATCTTGGCTTTTTGCTTAGCTTTTTGTCCTTTAC
ACGCATTTATGTTCTTTCTTTGTCCTTTGCTATACACTACTTGTCTATCGAATACGAAGC
TTATAATCGTAGAAAACTACAAGATAGGCATAATCACTTTTGGATATTTATTTTCGTAAG
TAGAAGTTGGCCAGTGCATATTACGTAGATTGATATCCAACCGCTCACCTTGCCCAGCCC
CTAAAGCAAAGAAAACAAAACATCAATGCATGGTTTATAACGTCTTGCTTTTTAATTAGT
TTTTGTCCTTTACACTCATTTATGTTCTTTCTTTGTCCTTTGCTATACACTACTTGTCTA
TTGAATAATATGCTTATAATCGTAAAAAACTACAAGTAGTCATAATCCTTTTGGATATTT
ATTTTCGTAGGTAGAAGTTGGCCATTGCAAATTACATAAATGATATCCGACCTCTAACCA
GCCAGGCCGCTAAAANANNCNNNCNNCNCNCCNGNANCNNNNCTNCCNNTGAGCGGNTAG
CCACAGGCCCACANTTTACNNCACCTCTAATAACGGTATCAGCGAGCTTGNAAGTCCTTT
TCTACAAACTGAACAATGCAATACGAAAGCTGTTGGGTGATGACCTGATGAACATTTGGG
CTTGTGGAGAAGGAATCAAGGCTCGCAAAAGGAAGAGCCTTGTGCTCCTTCTTTTAAAGG
CAAAGCCAAACCCCTAATTATACTTCCAAGAATC
GenBank Accession FR818152 [GenBank]
Graphic View Graphic view of gene At5g47560
Predicted Position of Insertion Chr5:19287742 - go to primer design
BLAST e Value 7e-127
Hit Clone Code (BAC ID) MNJ7
Hit Gene Code At5g47560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tonoplast dicarboxylate transporter
Insertion Classification TS2TE (3')
Confirmation Status unknown
Other FSTs Supporting this Hit FR818153 [GenBank]


Last Updated on 10.06.2021 13:37