SimpleSearch - Line and FST details
Line specific information
| Line ID | 939A02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N490050) |
| Segregation Analysis | 50:41:41 |
| Confirmed for Hit | At1g79820 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 9516 |
Gene hit At1g79820
| Sequence (A. th genome BLAST matches underlined) | >09-K101630-0022-939-A02-8409 GAACATTTCATTTCCTGAGCCTCACATTTAACTCTTCATCAAATTTAGTTTCAGACACCG ACAGTTCTAGAGCACCCACGTTAAGACAGTACTTGGGCGGAGCTAACGTTGCTCTCGATG GGGAGAGAGATGCCGGGCGAGAGGCACGACTTGGCTCCTCTTGCCTGACACATGCACTTA TCATAGAATCAGTCCTTAAGGGAGACAGATGATGTTATCGAGTGCTCCAAGAAAAACAAT GCATCGAGAAGAAATACAACTTGAGCCTGAGAAATAAGCTTACGAAAGAAAAAGATAATA GCCTATGGGATCCTCCCTATAGTGAGAGCTACTACTCTTTCCGGAATACTGCCATGATAA TATAGCTTGGGCAACCCTCACGCGGGGCGCATGGGAATAGCGTTTTAACGAAAACTCATA AGGCCGCGGGGAACCACAACTTCGTCTAACGTTTTAAGAGCAGTAGATGTCAGCGAAAGT TATCGATACTGGGGGAGCGCGCCCGGTAGGAAGAGAAGATGTGGAGGGTGCAAGGACGGA GAGGGGAGGGGGAGGGCGGTGCTCGAATGCGGAACCATGGAGGGAGGAGAAGCTGGGCTG CCGAAGGAAAAGAGGGAGTCAGCAACAAGAGAGAGGTAATGAACGGGCGGCGGGGAGACG GTGATGGTAAGACAGAAGGAGGGAGCGGAGGAGGGGGGTGGGAGTATGGGCGAGCGGGGA AGCGGCGGAGAGGGCGAGGTGAGGCGAGGAGGGTGGAGTAAGGCAGGGGAAGGTGAAGGG GGGAGAGCCTGGGTGGGGCGAGCGGGAGGAGAGGAGTAGGTGCGGGATCGTGGGCTGCGG GGAGCGGTGAGAAGGACTAGGGGGCGAGCAGAAAGGGACGGGAGGCGTAAGCAGCGGAGA GGAGAGCACGGCGGAGTTGGGGAAGGAGTGCGTGAGGGGCAGGGCGTGGCATAAGAGGA |
| GenBank Accession | CU458171 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:30025921 - go to primer design |
| BLAST e Value | 6e-44 |
| Hit Clone Code (BAC ID) | F20B17 |
| Hit Gene Code | At1g79820 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Major facilitator superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MCD7
| Sequence (A. th genome BLAST matches underlined) | >09-K104991-0022-939-A02-8409 TTTAGTTTCAGACATCGAAATTCTCGAACACAAAAGTTAAAACAATATTTGGTCGGAGGG AAAATTGCTCAAGAAGGGGAGAGAGATGCGGAGCGCGGGAAACGACAAGTGGCCACGTGG ATCCTCCCTANANTGAGTCNTATTAC |
| GenBank Accession | FR818243 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:22804541 - go to primer design |
| BLAST e Value | 1e-54 |
| Hit Clone Code (BAC ID) | MCD7 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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