SimpleSearch - Line and FST details


Line specific information

 
Line ID 951C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N491226)
Segregation Analysis 50:50:22
Confirmed for Hit At3g23250
Parent of DUPLO pair none
Parent of pair(s) 3228, 3351

Gene hit At1g16720

 
Sequence (A. th genome BLAST matches underlined) 
>11-K113507-0022-951-C02-8409
TGATGTAGACATATTATCATAATGCACGTTTCGTTTTATAGAAACGCTGCAGGAATCTAC
ATTTTAGATATGAAAAAAAGTTGCTAATTACTCTTTCTTTTTCTCCATATTGACCATCAT
ACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTCTTGGGTGTTTATAAC
CTCACCAAGGCTTTTCAGGTATAGTAAGATTTGTCCATGACTCTACCGCGGTTAATTTGG
TTTCTTGTTGTGTCGAGCAAAGAGTACTTTATTCGTGTGTGTCGTTTTGAGTATTTGCAG
GATTACAATAACAGACTAACCAGCCCGGCCGC
GenBank Accession HE666817 [GenBank]
Graphic View Graphic view of gene At1g16720
Predicted Position of Insertion Chr1:5723758 - go to primer design
BLAST e Value 7e-65
Hit Clone Code (BAC ID) F19K19
Hit Gene Code At1g16720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation high chlorophyll fluorescence phenotype 173
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g23250

 
Sequence (A. th genome BLAST matches underlined) 
>11-K102150-0022-951-C02-8409
CTGATATCTCCCGGTTTGTTATCCATATTAATCTCGTTGCTATAGCCGTCGTGGCTAACG
AGTGTCATCGAAGAAACCTCACTTGTCGAAGGCGATGTCGAAAATAAGCTTTCTCCAGAA
GGGTTTGATGAATCTGCTATGGGATCCTCCCTATAGTGAGTTGTATG
GenBank Accession CU458339 [GenBank]
Graphic View Graphic view of gene At3g23250
Predicted Position of Insertion Chr3:8310362 - go to primer design
BLAST e Value 9e-68
Hit Clone Code (BAC ID) K14B15
Hit Gene Code At3g23250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 15
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37