SimpleSearch - Line and FST details


Line specific information

 
Line ID 953B06
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 3823, 79825, 79875

Gene hit At1g80420

 
Sequence (A. th genome BLAST matches underlined) 
>42-K102152-0022-953-B06-8409
AGCATTTAAATTGAAATCTACCCGTGACTTCTCTTTGATCGAAATCATCAGAGACTATTC
AATTTGTCAACATACGGTACAAAATCAGATCAAAAATGACGGGTTTTCAATTTAACAAAT
GATTCAGCTATGGGATCCTCCCGATAGTGAGACCTACTCGACTCGCAGTCAAACCTATTT
GAGAGGGAGAGGGAACCAAGATAGGAGGGAGGTGGGGGGATAAAATAAAGATAAGTACGT
GCAGATCGGTTGTCAGATTAATGGAGGGTAGAGGAGCACGCGAGGAGAACGACCGGGAAA
CGAGAAAATAGCGTAGTGGAAGGGCGGGACGAAGGGAGGGAGAGGCAAGGAGGGGGAGCA
AGAGTGAGCCAGACACAGTAGCGAGGATATCCGGAAGGCTGGTAGTGGGGACAAAGGGAG
GCAAGAGAAAACAAGGGGGGGGAGAAAGAAGAGAGAAGGAGCGGGCAAAGGGGACGGAGA
CGTGAGGGATAGGAGAGGAAGAAGGGGCGGGGGGTAGACGGAAGGGGAGGACGAATGATA
GCGGAGTAGAAAGC
GenBank Accession CU458347 [GenBank]
Graphic View Graphic view of gene At1g80420
Predicted Position of Insertion Chr1:30237669 - go to primer design
BLAST e Value 3e-43
Hit Clone Code (BAC ID) F5I6
Hit Gene Code At1g80420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BRCT domain-containing DNA repair protein
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit HE666904 [GenBank]

Gene hit At1g31400

 
Sequence (A. th genome BLAST matches underlined) 
>42-K113890-0022-953-B06-8409
TGTTGGTGAAAGTCAAGTGTTTTTGAAAATGATTTACTTGGGACTATTAGCCCACCAATG
AGCTATCAGGAGCCGAAGCGTTTTCACAATTCTCAAGTTTTCGTAATCAACACGATTCAC
ATTCAAACCTATTTGACAGTGAAGTGACTCTACTTATAAAAGTTGTTGTGTGATATTATA
AAGTTTTGTACATGCCACTCGGTTCTCGGATTTATTCTCTTTTCATCTTCTTCTAACCTG
CCCGGCCG
GenBank Accession HE666903 [GenBank]
Graphic View Graphic view of gene At1g31400
Predicted Position of Insertion Chr1:11244969 - go to primer design
BLAST e Value 6e-130
Hit Clone Code (BAC ID) T19E23
Hit Gene Code At1g31400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAF-like family protein
Insertion Classification 3' region
Confirmation Status unknown


Last Updated on 10.06.2021 13:37