SimpleSearch - Line and FST details


Line specific information

 
Line ID 956H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N491770)
Segregation Analysis 50:47:43
Confirmed for Hit At4g37360
Parent of DUPLO pair none
Parent of pair(s) 6173, 8839, 10556, 10564, 10581, 10582, 11410, 93708, 93723, 93733, 93734, 93736, 93737, 93738, 93739

Gene hit At1g17460

 
Sequence (A. th genome BLAST matches underlined) 
>48-K033598-022-956-H06-8409
CCATCTACCTTGGAAATAGCAAACTTTTTTGTTCTGCTTTATTTTTTTTTGTTTTGGCTC
GCTTTCGGCTTTTTTTTTCCCAAAAACAGTGCCATACAGGTCCGGATTCCAAAGCTTTTT
ATTCCCTCAATTTCAAAATGCCAATTGGGATCCGTATAGTTATGCGGGAACCCCCAAGGG
GATCCTCCCAATAGTGAGACCAAGGGAGCACACAAATCTATGTTTTCTGACTTAACATTC
AACAACATCATTAGAATACTATGGGATCCTCCCTATAGTGAGAAGA
GenBank Accession CT955787 [GenBank]
Graphic View Graphic view of gene At1g17460
Predicted Position of Insertion Chr1:5998847 - go to primer design
BLAST e Value 1e-33
Hit Clone Code (BAC ID) F1L3
Hit Gene Code At1g17460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRF-like 3
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At4g37360

 
Sequence (A. th genome BLAST matches underlined) 
>48-K033597-022-956-H06-8409
GCCTCAGGAGGCTTATAGGCCGTCTCTTACGGAACTCTACTTACGTAAGAGAAGTCTTTG
TTCCAAAAGGATTAGACCTTGAATACTAATATATAATTTCTTTTATGCTATTAGCAAAGT
TTTTTTGTAAATTTTTGTGCTATTAAAGTTTTATGGAGGTGTGTTATTTTTGCAGGGGTT
TACTAAGGTTGAGATGAAATCAATGTTTTCTGACTTAACATTCAACAACATCATTAGAAT
GCTATGGGATCCTCCCTATAGTGAGACCT
GenBank Accession CT955786 [GenBank]
Graphic View Graphic view of gene At4g37360
Predicted Position of Insertion Chr4:17568401 - go to primer design
BLAST e Value 2e-114
Hit Clone Code (BAC ID) F6G17
Hit Gene Code At4g37360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 81, subfamily D, polypeptide 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37