SimpleSearch - Line and FST details


Line specific information

 
Line ID 957B08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 5041, 5167, 5173, 77181, 77185, 77196, 77200, 77201, 77202

Gene hit F13A10

 
Sequence (A. th genome BLAST matches underlined) 
>58-K033600-022-957-B08-8409
TTGAGATGGTATTACTTACGGTGATCTTCCCCATAGTGCGGCCTATAAGTGGGGCTTACA
AACTTGTTTCGGCTTCTTGGAAATTGCGTTGAAGGTACATTTATGATGCTAGTTTATGAC
TATGGAATCCTCCCTAGAGTGAGAGGTAGTGGGAATTACTCTTTCTTTTTATCCTTATTG
ACCCTATGGGATACACTTAATAGTGAGAACTTGTGTTAATATTTCCCAAGTATAGATTTA
ACAGAAGATCAAATATCTACTCAAAACTGAGTTATAATTAAGTTAACACATGAAAATAAA
TAGAAAAAACAATGAATATCTTGCACGGCTTTCCAAAGCCCTATGGGATCCTCCATATAA
TGAGACGGAGGGAAACCTCAACTATAAAAAGTGAGTAAAATAAAAGATA
GenBank Accession CT955809 [GenBank]
Graphic View Graphic view of sequence CT955809 of line 957B08
Predicted Position of Insertion Chr2:19103812 - go to primer design
BLAST e Value 1e-33
Hit Clone Code (BAC ID) F13A10
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g31420

 
Sequence (A. th genome BLAST matches underlined) 
>58-K104879-0022-957-B08-8409
ATTTTTTCGCACTTTTGGCCGGATATCAAACAGAAAGTGATTGATGAGGTAACAAGATTC
TTTGAGAGGTCAGAGCTATGGGATCCTCCCTATAGTGAGACNNACTCCNNNCNNGANNNA
CCCNGCTTTTTTTCTCTTCCTTTTTCTCCATGTCCCCCCCCTTATTATAATCTTAAACTA
CATTTTCATAAACCCACAATTTACCATCCTTCTTATTTATAGGCCAAACCAATAAACAAA
TTATTCTAATTCCGAAATCTTTATTTCCACCTGTCTACCTTCCCCTCCAAATGGGG
GenBank Accession FR818774 [GenBank]
Graphic View Graphic view of gene At3g31420
Predicted Position of Insertion Chr3:12790650 - go to primer design
BLAST e Value 5e-29
Hit Clone Code (BAC ID) T22C2
Hit Gene Code At3g31420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit FR818775 [GenBank] CT955808 [GenBank]


Last Updated on 10.06.2021 13:37