SimpleSearch - Line and FST details


Line specific information

 
Line ID 957G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N491849)
Segregation Analysis 50:46:43
Confirmed for Hit MLM24 At4g28070
Parent of DUPLO pair none
Parent of pair(s) 12681

Gene hit MLM24

 
Sequence (A. th genome BLAST matches underlined) 
>07-K033599-022-957-G01-8409
ACGAATATAGCAAATTTACTTAACACGATTTGTATCATACTTCCTACTTAATATGATTTT
AAGAACATGCTATGGGATCCTCCCTATAGTGAGACTTATGGATCCCCCCCTTTTTTGGGC
TTCGTGGTCCTCGCCTTTCTTTGGTTTTCTTGTCTTCGGGCTTGCTTTCGTTTTTGGTCC
TTTGGCTCTTCTGGTTCTGTTTGGGCTTTTTTTTTTTGGTTTTTGTGTTTTTTCTTCTTT
TTCCCCCTTTTTGTATTTTCCTTTTTTTTCTTCTTTTTGGTTTGGGTTTTTTCTTATTTT
TTCTTTGTTGTTCTCTTTTATGGTTCCTCTTTTCTCCATATTCTTTTTTTCCCTTCGATT
TGGTCAGCCATTATG
GenBank Accession CT955864 [GenBank]
Graphic View Graphic view of sequence CT955864 of line 957G01
Predicted Position of Insertion Chr3:8397130 - go to primer design
BLAST e Value 4e-18
Hit Clone Code (BAC ID) MLM24
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g28070

 
Sequence (A. th genome BLAST matches underlined) 
>07-K033600-022-957-G01-8409
TGGGATCCTCCCTATAGTGAGATTTACTTAACATGATTTGTATCATACTTTTTACTTACT
ATGATTTTAGGAACATACTATGGGATCCTCCCTATAGTGAGACGGTATGCTGCCGTCCTA
TTATGGAGCCCGAAGAAGGGTACACCTTCCAGAGCCAAAGTATGAAATTTCTCTGTAATG
AAATTTGCATCTCAAGACTAAGCATCATGTAAGAATTCCAGTGCAATGACAAGGTCTGAA
GGCACTGGGGTAAGACTTACTGAATAATCCGAGATAATCGGCTGCGCCTATGGGATCCTC
CCTATAGTGAGACNCTNNNT
GenBank Accession CT955865 [GenBank]
Graphic View Graphic view of gene At4g28070
Predicted Position of Insertion Chr4:13948120 - go to primer design
BLAST e Value 1e-97
Hit Clone Code (BAC ID) T13J8
Hit Gene Code At4g28070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AFG1-like ATPase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37