SimpleSearch - Line and FST details


Line specific information

 
Line ID 965H07
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 11909
Parent of pair(s) none
Note

Gene hit At5g57290

 
Sequence (A. th genome BLAST matches underlined) 
>56-K113265-0022-965-H07-8409
AAATAAATTTCTTTGTCTTTTGCTTTTCCCCTATCTTTGAGACCCGATTCGAAACTCGCC
CGTTTTAACTATCTGAACACTTCATTGATGTTCACACTTGCTGACATCGACATTTCTTTT
ATGACGCTCTATCTAACCTGCCCCGCCCCTATTCTCCATATTGACCATCAGACTCATTGC
TGATCCATGTAGATTTCCCCGACATGAAACCATTTACCATTGAATATATTTATGATGGTT
TCTCCATCCTTGGCGAAGGCTTTCATTTTGTTTTGCCTCTACATTTCTTTGAGACCCATT
GAGTACACACACGTTTAAATATCGAAAACAGTAATGATGTTCAGAATTTATTTTAATGAC
AAAACTTTTAAAACGCTCTAACTAACCTGCCCGGCCGC
GenBank Accession HE667323 [GenBank]
Graphic View Graphic view of gene At5g57290
Predicted Position of Insertion Chr5:23206955 - go to primer design
BLAST e Value 3e-41
Hit Clone Code (BAC ID) MJB24
Hit Gene Code At5g57290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 60S acidic ribosomal protein family
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At3g07170

 
Sequence (A. th genome BLAST matches underlined) 
>56-K113264-0022-965-H07-8409
AGCCCCATTTGGACGTGAAGTAGACACGTCGAAATAAGATTTCCGAATTAGAATAATTTG
TTTATTGCTTTCGCCTATAAATACGACGGATCGTAATTTGTCGTTTTATCAAAATGTACT
TTCATTTTATAATAACGCTGCGGACATCTACAATGGGACATGTCGATATTCAAAAGAGAC
ATCATGGGTCTCAAAGTGGGCGAGAAGCTGGTTCAGGCGTGCGGGATTTACGGGATCAGC
TCTCTGGGACAATGAATCAGCAACCAAAAAACAGTGACCCACCAAAATCCAAAGCGGAGG
CTGCTAACCAGCCCGGCCG
GenBank Accession HE667322 [GenBank]
Graphic View Graphic view of gene At3g07170
Predicted Position of Insertion Chr3:2281128 - go to primer design
BLAST e Value 4e-71
Hit Clone Code (BAC ID) T1B9
Hit Gene Code At3g07170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Sterile alpha motif (SAM) domain-containing protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37