SimpleSearch - Line and FST details
Line specific information
| Line ID | 967D08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N492780) |
| Segregation Analysis | 50:50:43 |
| Confirmed for Hit | At4g33930 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12733 |
Gene hit At4g33930
| Sequence (A. th genome BLAST matches underlined) | >60-K113600-0022-967-D08-8409 TTTGTCGTCTTATCCTACTGTACTTTCATTATACAAAAACGCTGCGGACATCTCCATTTT TGAATTGAAATAAAATTGGTAATTACTCTTTCATTTTCTCCTTATTGACCATCATACTCA TTGCTGATCCATGTAGATTACCCGGACATGAAGCCATTTACAATTGAATATATCATTGAA ACCCATTATGCATGACTGGTTTGAGCCAAAACTGTGATTGTTATCTGTAGAGCCAGTGCT GCTTGACTGATTTGACCCAGTGCCTATTAAATGGTTTAAACCACAGCTGTAACCGTTGTG TCTAACCTGCCCGGCCACT |
| GenBank Accession | HE667443 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16264648 - go to primer design |
| BLAST e Value | 7e-22 |
| Hit Clone Code (BAC ID) | F17I5 |
| Hit Gene Code | At4g33930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Cupredoxin superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g34930
| Sequence (A. th genome BLAST matches underlined) | >60-K113601-0022-967-D08-8409 GTGAATGTATTACCTCGAAGTAACATTACCGAATTAAAACAAATTGGTTATTGCTATCGC CTAAAATACTACGGATCGAAATTTGTCGTTTTATCAAAATGTACTTTCATTTTATAATAA CGCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCT CCATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAACCATTT ACAATTGAATATATCAGGATCATGCCCGGTTCTTAATTGTCTTTACCCTCATCTGAGATT GTTATCTGTAAAGCCGCTACTGATTGAGTGGTTTTAGACATAGCTGCTCAATTCGTTGAA TTAACAGCTCTAGACAATTTGCTGTAATGACCAATGAAATATTCAGGTGTCGTATCCGAA TAAAACTTGGAGGTTTTCTATTATAACTACCTGACCAAGTAAGTATTTTAGTTTATAAGA ACACAATACTATCTTCCGCGTCCTCACCTGCTGGGCCGGTAATAAAAANNNNNNGNTGNG GGCAACCCGCAGGTGGGCGGGAAAAAAAAGAANAGCAGATAGTTGAGGACGGTGGAAGGA AAAAGACNNGAATAATANAAGACCTAGAAGAGAAAAGAGAGCGTAAAAGAGAGCAAGGGA GAGGCGAACAGAGGTGCGAGAAGGAAGGGAGAAGATACANAGAGCGGCACGGACCAGGAT GTGAAGAGGAGAAGACAGGCGACAAATAGAGACAGACGATNGGAATAGAGGATTCGGGCA GGAGACGGGGAGAGAAGGTCGACAGCAGGCGAAAGCGCAGTGGGAAAGAAGACGTGCTGC TAATAAAAAGTATGAGAAAAATAAATGGAGAGAAATTAGAAGTAAAAGGACTACGATAAC AAANGACTGGAGGCAAGTAGGAGGAAGGAGACGAAGCAGTAGAGAGCCCAGGAAAAAGGG GCGGAAGGAGCATGTACAGGAACAAAAAGAAAGGTCGAAGACTAGTGTATAGGAGAAGAA GATAAAGAA |
| GenBank Accession | HE667444 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:14737403 - go to primer design |
| BLAST e Value | 1e-20 |
| Hit Clone Code (BAC ID) | F19I3 |
| Hit Gene Code | At2g34930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | disease resistance family protein / LRR family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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