SimpleSearch - Line and FST details


Line specific information

 
Line ID 972C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N493241)
Segregation Analysis 50:44:41
Confirmed for Hit At1g71270
Parent of DUPLO pair none
Parent of pair(s) 11685

Gene hit At1g71270

 
Sequence (A. th genome BLAST matches underlined) 
>03-K113167-0022-972-C01-8409
GGNNNGGANCGAGCGAAGGGAAGGCCCTGTTTGTATCTCTTCCGCTGTGCGCTGGATAGA
CAGTTACGCACAGGCTAGGCTGGTCTTAAGATATTTTATAAGTTTTAAAGAGTTTTAGGC
GGAAAAATCGTCTTTTTTCTCTATAATATGAGTCACTTACATGTGTGACCGGTTCCCAAT
GTACGGCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGGGTTCCC
AATGTACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTACTAACCTGCC
CGGCCGCTAAANNAANTGACCNATAGCTTGGCGGAGTAAACCAAGGAGGTTTCCGGCTAG
GTTGCTTTATGGAACTCTCTGAATGGACCTTTGGTCTTCTGAGACTGCATCTGCGAATGG
TTCGGCGTGGAGTTGCCTGTCATGCTCCACCATGTGGTGAAACATTTTATTCTCGACATT
AACTCTCCAGACGCCATGTATGAACAGTTCGGCAAACTGTTCGGCGAGATCTGTGACGAC
CTCTGCTCGGAGCTATTAACTGAATGGGAAATGCGGCACCCATAACCTGGCCTGTCGCTA
GCTGTGTCGCTATTAACGGTATATGTTTTGTGATGATTTCTTTGGTGAAGAGTCCATATT
CTACGAAAATTTTGCGGGTAATTTCTAATCTGTCTCCCTTCCTTTTGCTGTACCAAACTT
TGGGGATTTTGTTACCTGTGTAAAAAAACATCTGTTTTCCCTGTAATACTGGTATACCAA
ATTTGATATGGGGTTGAACAACCTGTACAAAATTATCTTCTCTTCTTCCGAATAAAAAAC
TGAACCCTCTTGTATTTTACAATGGATATGATAATTG
GenBank Accession FR819432 [GenBank]
Graphic View Graphic view of gene At1g71270
Predicted Position of Insertion Chr1:26866947 - go to primer design
BLAST e Value 1e-91
Hit Clone Code (BAC ID) F3I17
Hit Gene Code At1g71270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Vps52 / Sac2 family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37