Sequences from confirmation amplicon


Sequence 47-K102871-0022-349-H10C-EQ30 is shown.

Sequence Name 47-K102871-0022-349-H10C-EQ30
GenBank Accession LN506167 [GenBank]
Line ID 349H10
Sequencing primer gene specific primer, EQ30: 5'-TGTCTTTCAAGGATTCACATTCTG-3'
Sequence (A. th genome BLAST matches underlined) 
>47-K102871-0022-349-H10C-EQ30
CAACAATCTTGCTCTCCGCCGCCAGTAAAGCCTTGAACACAGTACCAAAACTACCTGACC
CAACCATATTGCTTGAAGAGAAGCCATTTGTCGCATTTCGTAGATCTCCATAGCTTATCT
TCTCATGGAAAATCTCCAACTTAGAAGGAACCAGGTTATTTGTCTGCTGGTTCTTCCTTC
TTTTTCTGAACCAACACAGAACCATCGAAGCTATGACCAACAGCAATAGCAAAGCTATGC
CTATGCTTACTAAAATTGCAACTTTCTTTAAATGAGAGGAATGCTTTGTCTCCACTGGTG
GTTCTTGGGCGAGGCATGGCTTTAGTTTCAGATCCTTGATGCCTCCACATAGGTTTTTGT
TTCCAAATACAAAAACTATTGTAGAGTTCTGAAAATTTCCTTTGGAAGGCACCTTTCCCG
TAAAATTGTTAATAGATAGATTGAGATATTCCAACTTGGAGAAGTTTGCAAAATATTCAG
GTATACTTCCCGATAGATCATTGTTTGACAAATCAACTCTTCTTACACCCATCAACCCTC
TTATATTTGGAATTGCTCCATCAAAAGAATTTCCTTGTAGAAAAAGTTGTTCC

Other confirmation sequences from the same hit.

Sequence Name 46-K102871-0022-349-H10C-EQ29
GenBank Accession LN506167 [GenBank]
Line ID 349H10
Sequencing primer gene specific primer, EQ29: 5'-CTGCTACCAAACATTCGTGAGTTA-3'
Sequence (A. th genome BLAST matches underlined) 
>46-K102871-0022-349-H10C-EQ29
TTTAACTCTACAAAAGTTTGGAATCAACAAAAACATGATGACAGGAGGTATATATCCGAA
CTTTGGAAAAGTACCGAGTTTGCAATACCTAGATCTTAGTGAGAATCCTCTAGGAAGTTA
CACTTTTGGAGATCTTGAATTTATTGATTCTTTGACTAATTGCACCCATTTGCAACTCTT
AAGTGTTGGTTACACTAGGCTTGGGGGTGCCTTGCCTACATCCATTGCCAATATGTCCAC
AGAACTCATCAGTTTAAACCTTATAGGAAACCACTTTTTTGGAAGCATTCCTCAAGATAT
TGGGAATCTCATAGGCCTACAAAGACTTCAGTTGGGAAAAAATATGTTGACCGGACCACT
CCCAACTTCTTTGGGAAAGCTTCTAAGATTGGGGTTATTAAGTCTATATTCAAATAGGAT
GTCAGGAGAGATTCCATCTTTTATAGGCAACCTAACTCAGTTAGAAATACTATATTTGTC
CAACAATAGTTTTGAGGGAATTGTTCCTCCGAGTCTCGGGAAGTGTAGTCACATGCTTGA
ATTTACTCATTGGGAAATCATGTCCGGGAAATCTACATGGATCAGCACTGAGTATGATGG
TCAATATGGAGAAAAAGAAAGAGTAATTACTGATTTTTTTTCAAT

Sequence Name 47-K102876-0022-349-H10C-OriL
GenBank Accession LN506167 [GenBank]
Line ID 349H10
Sequencing primer gene specific primer, OriL: unknown
Sequence (A. th genome BLAST matches underlined) 
>47-K102876-0022-349-H10C-OriL
AATATGCAAATCCAACCCTTGTTAACCTAAGCATGGAAGGTAACTCTTTGAGCGGCTCTC
TACCAAATGATATTGGAAGTCTACAAAATCTTGTAAAACTATCACTTGAGAACAATAAGT
TTTCAGGACATCTCCCACAAACCTTGGGAAATTGTCTCGCGATGGAACAACTTTTTCTAC
AAGGAAATTCTTTTGATGGAGCAATTCCAAATATAAGAGGGTTGATGGGTGTAAGAAGAG
TTGATTTGTCAAACAATGATCTATCGGGAAGTATACCTGAATATTTTGCAAACTTCTCCA
AGTTGGAATATCTCAATCTATCTATTAACAATTTTACGGGAAAGGTGCCTTCCAAAGGAA
ATTTTCAGAACTCTACAATAGTTTTTGTATTTGGAAACAAAAACCTATGTGGAGGCATCA
AGGATCTGAAACTAAAGCCATGCCTCGCCCAAGAACCACCAGTGGAGACAAAGCATTCCT
CTCATTTAAAGAAAGTTGCAATTTTAGTAAGCATAGGCATAGCTTTGCTATTGCTGTTGG
TCATAGCTTCGATGGTTCTGTGTTGGTTCAGAAAAAGAAGGAAGAACCAGCAGACAAATA
ACCTGGTTCCTTCTAAGTTGGAGATTTTCCATGAGAAGATAAGCTATGGAGATCTACGAA
ATGCGACAAATGGCTTCTCTTCAAGCAATATGGTTGGGTCAGGTAGTTTTGGTACTGTGT
TCAAGGCATTGCTCCCGACGGAGAGCAAGATTGTTGCAGTGAAAGTTCTAAACATGCAGA
GACGTGGAGCTATGAAGAGCTTTATGGCAGAATGTGAATCCTTGGAAAG

Sequence Name 46-K102876-0022-349-H10C-8409
GenBank Accession LN506167 [GenBank]
Line ID 349H10
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>46-K102876-0022-349-H10C-8409
GATTTCCCAATGCGTAAATCAAGCATGTGACTACACTTCCCGAGACTCGGAGGAACAATT
CCCTCAAAACTATTGTTGGACAAATATAGTATTTCTAATTGAGTTAGGTTGCCTATAAAA
GATGGAATCTCTCCTGACATCCTATTTGAATATAGACTTAATAACCCCAATCTTAGAAGC
TTTCCCAAAGAAGTTGGGAGTGGTCCGGTCAACATATTTTTTCCCAACTGAAGTCTTTGT
AGGCCTATGAGATTCCCAATATCTTGAGGAATGCTTCCAAAAAAGTGGTTTCCTATAAGG
TTTAAACTGATGAGTTCTGTGGACATATTGGCAATGGATGTAGGCAAGGCACCCCCAAGC
CTAGTGTAACCAACACTTAAGAGTTGCAAATGGGTGCAATTAGTCAAAGAATCAATAAAT
TCAAGATCTCCAAAAGTGTAACTTCCTAGAGGATTCTCACTAAGATCTAGGTATTGCAAA
CTCGGTACTTTTCCAAAGTTCGGATATATACCTCCTGTCATCATGTTTTTGTTGATTCCA
AACTTTTGTAGAGTTGAAATATTGGAAAGTGTTGTTGGAATGGCTCCCACTAGATCATTT
TCTCCCAGATTTAACTCACGAATGGTTTGGTAGCAG


Last Updated on 06.12.2018 16:11