Sequences from confirmation amplicon


Confirmation sequences for line 102E04 and hit At5g42840 are shown.
Line ID 102E04
Locus At5g42840 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:17179991
Primers used for PCR 04xp - 3144, show primer details
   
Sequence Name 46-K119512-0022-102-E04C-04xp
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer gene specific primer, 04xp: 5'-CCACATCTTCAAGTACTGGGTTCT-3'
Sequence (A. th genome BLAST matches underlined) 
>46-K119512-0022-102-E04C-04xp
ACCTCAGAGAATGAAGCCGTGCATAACANTAGTAAGAACAATAGCATATGTTGTCATAAT
CCTTAACAAAGAAGGGACCTAGGCAACGGCATTGACAATTCTTGCAAAGTGGCCGTGAAG
ATGTATTGTTTGGCAGCAATTCAACACCGTCTCTGATTGTTTCTCCTTGTTTGGAGAATC
TGATATCCCAAACTACACAAAATATATGAAAAGTAACCCCGCAATCTTTACAAGTGTAGA
ACCAACTCTTTGGATTTGTTTCTCTTTCGCAAATATCACACCAACATTTTCCGCTTGCTT
TTTCATCACCATAACAAAGAGTGAGTGGATGATCATCATACCTTGGAAGCCTTACCGTTA
ATGGTAGAGTGGCACAACGAAAATCCAAAAAGTAATTGCATTTGGTACAACCTATAGCAT
ACTCTTTTTGGACGATGCCGCAACACTCGCAAGTCTTCACATTACCGCGTCCAAGTTTAA
GGAAGAGTAAATGATGATCATGACTTCCATGGAAAAAAGGAACAGTAATCGAACTGCATT
GTAAGTCATAGAACTTTTCCCGATATACAGTTTTTGGAAATGAAGAGTAGATAAATCCTT
TGCAAAAAACTTGTTGACAAGCATTGCAAGTTTCTGTGTTGCGTTGGTTTTGGAGGCAAA
GAACGAGAGGTACTGGGCTCAGAAAATGTCGTTTCTTCTTTGAAATATTAGCACACGTTT
CGTGGAGAACGAAACTGCAAGATGATTCTGAACAGTTGTAGAATGTGTCGGTACCGATGG
GACAAACACATGCTACACACAAGATGCTCTTCTTCAAAGTAATACCATCTTTGCTCAAGT
TATGTTCATGAGTGAAATGAGTGATGGTGTTATCATCATCCNTCTAAAATGGCTCAATAT
CTTCAATTTCTTCAGTACTCCATCAAGCTCTCTTCCATCCCATACATCTTTTCCTGTTGC
ACACA
   
Sequence Name 14-K119511-0022-102-E04C-3144
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer T-DNA primer, 35St: 5'-GTGGATTGATGTGATATCTCC-3'
Sequence (A. th genome BLAST matches underlined) 
>14-K119511-0022-102-E04C-3144
TATCCTTCGCAGACCCTTCCTCTATATAGGAAGTTCATTTCATTTGGAGAGGACAGGGTA
CCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTAAATTACCTC
GTGTCATTCATGTCAACCACCATGACCACCGCGTTTCGTACAAGTATCCTCTTGGTCCCG
GAGAATGGAGATGTGGAGTTTGTTGGGAAGAAATTGATTGGTCATATGGGGCTTATTCAT
GCTCTCTTTGTCCTAATTATGCTATGCATTCACTGTGTGCAACAAGGAAAGATGTATGGG
ATGGAAGAGAGCTTGATGGAGTACTTGAAGAAATTGAAGATATTGAGCCATTTAAGAGGA
ATGATGATAACACCATCACTCATTTCACTCATGAACATAACTTGAGCAAAGATGGTATTA
CTTTGAAGAAGAGCATCTTGTGTGTAGCATGTGTTTGTCCCATCGGTACCGACACATTCT
ACAACTGTTCAGAATCATCTTGCAGTTTCGTTCTCCACGAAACGTGTGCTAATATTTCAA
AGAAGAAACGACATTTTCTGAGCCCAGTACCTCTCGTTCTTTGCCTCCAAAACCAACGCA
ACACAGAAACTTGCAATGCTTGTCAACAAGTTTTTTGCAAAGGATTTATCTACTCTTCAT
TTCCAAAAACTGTATATCGGGAAAAGTTCTATGACTTACAATGCAGTTCGATTACTGTTC
CTTTTTTCCATGGAAGTCATGATCATCATTTACTCTTCCTTAAACTTGGACGCGGTAATG
TGAAGACTTGCGAGTGTTGCGGCATCGTCCAAAAAGAGTATGCTATAGGTTGTACCAAAT
GCAATTACTTTTTGGATTTTCGTTGTGCCACTCTACCTTAACGGTAAGGCTTCCAAGGTA
TGATGATCATCCACTCACTCTTTG

Last Updated on 06.12.2018 16:11