Sequences from confirmation amplicon


Confirmation sequences for line 283C08 and hit At5g55410 are shown.
Line ID 283C08
Locus At5g55410 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:22460769
Primers used for PCR 11yh - 8474, show primer details
   
Sequence Name 32-K122428-0022-283-C08C-11yh
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer gene specific primer, 11yh: 5'-ATGCTTAATCAGAATCGCGAGTAG-3'
Sequence (A. th genome BLAST matches underlined) 
>32-K122428-0022-283-C08C-11yh
AGTGGACCTCACGGNTTAACGACTTGTGTAGGTGTCATTTCTAAATAGAGAAGAAGACTA
CACAAAAAATTTGTATGCTTTTGGACTCTTAAATGTTTTTCTATGTATTTACTTCGTTAG
TTCGTTACATAAATTTAAAAATGACAGTACTAACCATATATAGCTGAGTTATTTTCGGAA
GATATTTGATATTCTCAAGTGATATTTATTGCAAAATACCCTAATTTTTTTGTTTACTTA
TTTTTTTGGAAATTTAGATTTTATGAACGAAACAAAGATCTTCTCCACCGACGTTTTAAA
TATTTTGCTGATTTGTTTTTAAACCCCATGTGTGGTACGCACGACGGCCTACTATTTAAA
TTGTGACAATAACTATAGGTGATATTGAATTTAATATTTTTATTAGAACGCAAATCTCTC
TGTGTACAATTCGAAAGAAAATGTAAAAAAGCTTTACACAATAACACAATAGTTTTAGTC
AAACAAAAATTAATGTCTACTATAAATCAACTGTATGGTAAGATTTCCATAACTTTTGCC
GTCTAAATATTTTTTAAAGCAAGATCATAAAATATTCAAATCATCGTTTCAAGATGTTAC
AGTATTTTGATCTTTTTATAACATTTTATTGAAATAAAAGATATTAATTTGTTGAGAGGT
GCAAAACAACATTAATATATTTATTTTAAACAACATAAATACAAAATCATTAAAAAACCA
ATCTTTTATTTAACAAGTGATAATAAAACTTTTGAAACTTGATGATAATTACCATATTAA
AAGCCAATAATTATCAAATTCATGTCAGTGCTAATGATCCATCTAAATGATCAACAAGGA
CAAAACCAACGGCGCCACAATGGTCACGCAAAGAGTCCAAAAAATCTTTGTCATTCACCG
CCAGAAACTATGGCATGCAAAACAACTAAGTCTTTCTCACATTTGTCCCTT
   
Sequence Name 08-K122427-0022-283-C08C-8409
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>08-K122427-0022-283-C08C-8409
TCATTGAAATGTCCATTTACACTGATAGTTAAACCGAAGGCGGGAAACGACAATCTGATC
CCCGGGTACCCTGTCCTCTCCAAATGAAATGAACTTCCTTATATAGAGGAAGGGTCTTGC
GAAGGATAGTGGGATTGTGCGTCATCCCTTACGTCAGTGGAGATATCACATCAATCCACT
TGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCACGATGCTCCTCGTGGGTGGGGGT
CCATCTTTGGGACCACTGTCGGCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCGCAA
TGATGGCATTTGTAGGAGCCACCTTCCTTTTCCACTATCTTCACAATAAAGTGACAGATA
GCTGGGCAATGGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATT
GCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGC
TCCACCATGTTGACGAAGATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAAC
TGTTCGCCAGTCTTTACGGCGAGTTCTGTTAGGTCCTCTATTTGAATCTTTGACTCCATG
GGAATTGGGGATCCTCTAGAGTCGACATGCATGCATGTAGCTTCTTTGACCATCATCGCA
AAGGTTAAAACCATTGCAAAAGTTGCAAATTGCATAAGGAATTTGGTATTGTTCTTACCC
ATTCTCTCTTTTCTCTAGACTCTACTTGTGAATCCCCCTCATGATCATGAGCTTGTTTAT
AAACAAGTTAAAATGCTAACCGAAAGTTAGTAGTAATTTAAGAGCGTAACGTAAAGATAA
GTGTGGGTGATGTGATCAGGAGGCTTTTGAGTTGAGATGCGTGAAGAAAGGGGACAATGT
GAGAAAGACTTAGTTGTTTTGCATGCCATAGTTTCTGGGCGGTGAATGACAAAGATTTTT
TTGGACTCTTTGCGTGACC

Last Updated on 06.12.2018 16:11