SimpleSearch - Line and FST details


Line specific information

 
Line ID 283C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N427104)
Segregation Analysis 50:45:30
Confirmed for Hit At5g55410
Parent of DUPLO pair none
Parent of pair(s) 67957, 96861

Gene hit At5g55410

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015203-022-283-C08-8409
NTGATCCATGTAGATTGTCCCGGACATGAAGCACTTTACAATTGAATATGTCCATTTACA
CTGATAGTTTAAACCGAAGGCGGGAAACGACAATCTGATCCCCGGGTACCCTGTCCTCTC
CAAATGAAATGAACTTCCTTATATAGAGGAAGGGTCTTGCGAAGGATAGTGGGATTGTGC
GTCATCCCTTACGTCAGTGGAGATATCACATCAATCCACTTGCTTTGAAGACGTGGTTGG
AACGTCTTCTTTTTCCACGATGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCACTGTC
GGCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCC
ACCTTCCTTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAATCCGAG
GAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGAC
TGTATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGAT
TTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGC
GAGTTCTGTTAGGTCCTCTATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTAGA
GTCGACTGCTCGCCTTGAAGCTTCTTTGACCATCATCGCAAAGGTTAAAACCATTGCAAA
AGTTGCAAATTGCATAAGGAATTTGGTATGGNNCCTTACCCATTCTCTCTTTTC
GenBank Accession FR807183 [GenBank]
Graphic View Graphic view of gene At5g55410
Predicted Position of Insertion Chr5:22460765 - go to primer design
BLAST e Value 5e-37
Hit Clone Code (BAC ID) MTE17
Hit Gene Code At5g55410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37