Sequences from confirmation amplicon


Confirmation sequences for line 441A08 and hit At1g43040 are shown.
Line ID 441A08
Locus At1g43040 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:16184469
Primers used for PCR 15oc - 8474, show primer details
   
Sequence Name 39-K114805-0022-441-A08C-15oc
GenBank Accession LN503455 [GenBank]
Sequencing primer gene specific primer, 15oc: 5'-CCAGCTTCTCAATAAACATCACAA-3'
Sequence (A. th genome BLAST matches underlined) 
>39-K114805-0022-441-A08C-15oc
GAAGCTACTATGTTTGTGGAGCCAAGAGCTTCTCCCAAAGAGCTAGATTACCGGACGAAG
GACGAGTCCGAGTTTATGTCGGAAACGATAGAGATACACAATGCAAGTTAGAGATGGATG
CTGATTTCTTGACACATCCTTTGTTCGAGGATCTCCTCCGGTTATCCGAAGAAGAGTTTG
GTCACTCATACGACGGTGCTTTAAGGATCGCCTGCGAGATACAAGTTTTTCTAAACTTGA
TCCATTACCTTAAGTCCACGAGTCATGCTCCTCATTATTATATTGATGCATCTCATTATC
CATGGGATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGT
ATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAAT
GTAGATG
   
Sequence Name 15-K114804-0022-441-A08C-8409
GenBank Accession LN493088 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>15-K114804-0022-441-A08C-8409
CTTAAGGTAACGGATCAAGTTTAGAAAAACTCGTATCTCGCAGGCGATCCTTAAAGCACC
GTCGTATGAGTGACCAAACTCTTCTTCGGATAACCGGAGGAGATCCTCGAACAAAGGATG
TGTCAAGAAATCAGCATCCATCTCTAACTTGCATTGTGTATCTCTATCGTTTCCGACATA
AACTCGGACTCGTCCTTCGTCCGGTAATCTAGCTCTTTGGGAGAAGCTCTTGGCTCCACA
ACATAGTAGCTTCTTCACCATGCATTTCATCTTCTTTGTTTTAAGTTTGAATAATTAGGT
TTTTGGAGTTGTGAAGCTTGTGATGT

Last Updated on 06.12.2018 16:11