Sequences from confirmation amplicon


Confirmation sequences for line SALK_001511c and hit At4g03960 are shown.
Line ID SALK_001511c
Locus At4g03960 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:1888907
Primers used for PCR SC06 - R204, show primer details
   
Sequence Name 41-K105819-SALK_001511C-SC06
GenBank Accession LN485305 [GenBank]
Sequencing primer gene specific primer, SC06: 5'-ATCGCAAATAGTCGCTGATTTAGT-3'
Sequence (A. th genome BLAST matches underlined) 
>41-K105819-SALK_001511C-SC06
CTGGGTTTATGAATGTTTCTGTTTAGTGAAATGTGAAATGGTCAAAAGAATTAGTCTCTA
ATCTATGATTATTGTTTTGAATGTGTATTGTGATCTATAGATATTTGTGTCCTGAGGCAT
ATCCAGAGGTGAATAGAGAGTTTGCAAAATCAAATGGGATCCAAGTTTTTCAATTTGGAA
TTGAAAGATGCAAGGTGAGATTGGTGGTGATACTAATTATTTACTTTTTCTTACTCTCGT
TATCGATGTTTTTGAAGCTTTGAATCACCTCTTCTTAGTTTCATAGTCTGTGGTTATCTA
TGATTGTTTCAATATCTCATATTGGTGGAATGATGAGTCTGAATCTCATAAGAATGGATC
ATAACTTCATAAGCTTATTCTAGGTTGTTGCTTCTGTAAAAACTTGTGTTTAATCTTCTT
GTTTAGCATTTGATTAGATAGAGCTATGCAAAGATGATGAATGTAACATATTCTGTGCTT
GTGGACTGATAAGTTGATTGTTCTCTTTGTGTTTTAAGGAACCATTTGTTAATATCCCTG
ACGAGGTAATCCGAGAAGCCTTACAAGTACTTCTAGGTACCCTCTCTTGTCTCTCTATAA
CCTATTTTCATCGAGAAATGTAATTGTTTAGATTATCAAAAGATTCAAAACCATCTAATC
CTTGACTCTTATCTTGCCTTATTAACCAGATACAGAGAATCATCCTGTCTTGATTCATTG
CAAAAGTGGAAAGGTAAACTGAGACATCTCTCATCTGCTTAACCCTAGTCACGATATGAT
CGAAGTAATCCTTATATCTTGTCTCTCTATCCGTTGCAGCATCGGACGGGATGTCTTGTA
GGTTGTGTGAGGAAGATTCAAAGATGGTGTTTGTCTTCTATCTTCGACGAGTACCAAAGA
TTCGCAGCTGCGAAAGCTAGAATCTCAGACCAGGATATATTGTGGTGTAAACAAATTGAC
GCTTAGACAACTTAATAACACATTGC
   
Sequence Name 57-K105820-SALK_001511C-R210
GenBank Accession LN485653 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined) 
>57-K105820-SALK_001511C-R210
CGTCATTTGTTTCACCACAATATATCCTGGTCTGAGATTCTAGCTTTCGCAGCTGCGAAT
CTTTGGTACTCGTCGAAGATAGAAGACAAACACCATCTTTGAATCTTCCTCACACAACCT
ACAAGACATCCCGTCCGATGCTGCAACGGATAGAGAGACAAGATATAAGGATTACTTCGA
TCATATCGTGACTAGGGTTAAGCAGATGAGAGATGTCTCAGTTTACCTTTCCACTTTTGC
AATGAATCAAGACAGGATGATTCTCTGTATCTGGTTAATAAGGCAAGATAAGAGTCAAGG
ATTAGATGGTTTTGAATCTTTTGATAATCTAAACAATTACATTTCTCGATGAAAATAGGT
TATAGAGAGACAAGAGAGGGTACCTAGAAGTACTTGTAAGGCTTCTCGGATTACCTCGTC
AGGGATATTAACAAATGGTTCCTTAAAACACAAAGAGAACAATCAACTTATCAGTCCACA
AGCACAGAATATGTTACATTCATCATCTTTGCATAGCTCTATCTAATCAAATGCTAAACA
AGAAGATTAAACACAAGTTTTTACAGAAGCAACAACCTAGAATAAGCTTATGAAGTTATG
ATCCATTCTTATGAGATTCAGACTCATCATTCCACCAATATGAGATATTGAAACAATCAT
AGATAACCACAGACTATGAAACTAAGAAGAGGTGATTCAAAGCTTCAAAAACATCGATAA
CGAGAGTAAGAAAAAGTAAATAATTAGTATCACCACCAATCTCACCTTGCATCTTTCAAT
TCCAAATTGAAAAACTTGGATCCCATTTGATTTTGCAAACTCTCTATTCACCTCTGGATA
TGCCTCAGGACACAAATATCTATAGATCACAATACACATTCAAAACAATAATCATAGATT
AGAGACTAATTCTTTTGACCATTTCACATTTCACTATAACAGAAACATTCTATAAAACCC
TAGCTATAATTATATCTCCATATCAACTAATCA

Last Updated on 06.12.2018 16:11