Sequences from confirmation amplicon


Confirmation sequences for line SALK_047206c and hit At1g68380 are shown.
Line ID SALK_047206c
Locus At1g68380 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:25636594
Primers used for PCR 54cs - LBb3, show primer details
   
Sequence Name 13-K109155-SALK_047206C-54cs
GenBank Accession LN484634 [GenBank]
Sequencing primer gene specific primer, 54cs: 5'-AGGCTTTTGTGTTTTCTCAATGTT-3'
Sequence (A. th genome BLAST matches underlined)
>13-K109155-SALK_047206C-54cs
GACGGCTAGTTCCTAACTTTATCAAGGACTTTGATTAATCTCACATCCCTATTACTGAAA
GTAACTTGTTAAGCACACACTGTATATTTCACTTACTTAAAGAAGATTTGGTAGTTAAAC
CGATTGCATCTTTGTTTTTGGACGAAGGGGGAAGAGAGTGATCAGAAATACATGACGATA
GATGCTAACCGGAGTAACTCATCCAAAGCAGTCGACGAAAACTTGCGAGCAAAGAGAAAG
CAAAGTCTCATCTTATTTTCTCCATTTTTCTTACAATCACCAACACTCTTCATCCTTAGC
CACTCCAAGAACTCCACATTAACCTCCCACTCACCAAACAATCTCGGGTGAGCCCTACGC
TTGCTCCAGTCAGTCCAAGTAAGCGTCCTATTCGCGTTACGCAACCCAAGGCTCGGCCTC
ATGTTGAGTAGCGTCGGGATATAGTGCTCGTCGGGGCAGCGAGAGTAAGCTTTAAAGATT
GGCCAGTAGAACGTATCAGAGACTACCTCGAGGGCCATGGCTCGGTCTAGCTCGAACCAC
TGAGAGCCTTTTCGCCATTGGTGCATGCGGATGTGAGGATACATGCGGCGGTCATAGCGG
ACGCGACCGATTGTGAGGTCGTANGAGTCGACGTGGGTTAGAGTGGAGTCGATGAGGAAA
GAGTAAACTGTGGAGAAATTGAAGAGAGGGATGCATGAT
   
Sequence Name 05-K109154-SALK_047206C-R210
GenBank Accession LN484394 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>05-K109154-SALK_047206C-R210
TCATTACTATAAACGTATGCAGAGAGTGGATTGGGGAAACGCAAACATGGTAGAAGCAGA
ACGAAGGTTATTAGCAAACGCTTTATTAGACATCAACAACGAACGTTTCATTCTTCTCTC
CGAATCATGCATCCCTCTCTTCAACTTCTCCACAGTTTACTCTTTCCTCATCGACTCCAC
TCTAACCCACGTCGACTCCTACGACCTCACAATCGGTCGCGTCCGCTATGACCGCCGCAT
GTATCCTCACATCCGCATGCACCAATGGCGAAAAGGCTCTCAGTGGTTCGAGCTAGACCG
AGCCATGGCCCTCGAGGTAGTCTCTGATACGTTCTACTGGCCAATCTTTAAAGCTTACTC
TCGCTGCCCCGACGAGCACTATATCCCGACGCTACTCAACATGAGGCCGAGCCTTGGGTT
GCGTAACGCGAATAGGACGCTTACTTGGACTGACTGGAGCAAGCGTAGGGCTCACCCGAG
ATTGTTTGGTGAGTGGGAGGTTAATGTGGAGTTCTTGGAGTGGCTAAGGATGAAGAGTGT
TGGTGATTGTAAGAAAAATGGAGAAAATAAGATGAGACTTTGCTTTCTCTTTGCTCGCAA
GTTTTCGTCGACTGCTTTGGATGAGTTACTCCGGTTAGCATCTATCGTCATGTATTTCTG
ATCACTCTCTTCCCCCTTCGTCCAAAAACAAAGATGCAATCGGTTTTACTACCAAATCTT
CTT

Last Updated on 06.12.2018 16:11