Sequences from confirmation amplicon


Confirmation sequences for line SALK_055351c and hit At5g01890 are shown.
Line ID SALK_055351c
Locus At5g01890 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:342412
Primers used for PCR 09cn - LBb3, show primer details
   
Sequence Name 20-K108893-SALK_055351C-09cn
GenBank Accession LN484841 [GenBank]
Sequencing primer gene specific primer, 09cn: 5'-TAGTTTAATCACCGGTATTGCCTC-3'
Sequence (A. th genome BLAST matches underlined) 
>20-K108893-SALK_055351C-09cn
CGAGGTCAGCACTCCTCCACCCTCCCTTCTTCTACCCTTCTCTCACCGTCTCACACAAGA
CCACGACGTCGTCCTCAGCGTACTCCACGGGTCTCTTCCCTGTCACCACCTCCAGCACCA
GGATCCCAAACCCGTAAACATCGCACCTGTCGGTTATCTTGACTGTCCGGCATGCAAACT
CCGGGGCTGTGTACCCCAACGCGCTCTGTACCTTGCCACTCAAGACGCACCTGTCCAGCG
CCGAAGCCAACAGTCTGGCCAGCCCAAAGTCAGAGACTTTAGCCTCCCCTGCGGCGTCAA
TGAGCACATTCGTTGCTTTCATGTTGTAGTGAGTGATGTTACTGCTATGCAGAAAAGCCA
GACCTCTTGCTATCCCTAGAATGATACTGAAACGTTGACGCCAAGTTAGGCAAACGCTCT
CATCTCCGTGGAGATGTCTGTACAAGCTTCCGCCTGAAACAAACTCGTGGATCAAGAGCT
GCAGCGATTGCGTCCAGTAGTACCCTTTTATCTCCACCACATTCTTGTGCCTCAGCTTCC
CGAGTTTTCTCATCTCTCTCTCGAACTCCTCCTGCGACTTTATTAGACCCGACACTGACA
ATATATCCAGGATATATTGTGGTGTAAACAAATTGACGCTTAGACAACTTAATAACACAT
TGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGC
TGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGC
CCCAGCAAGCGAAAATCCTGTTTGATGGTGGTTCC
   
Sequence Name 04-K108892-SALK_055351C-R210
GenBank Accession LN484360 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined) 
>04-K108892-SALK_055351C-R210
GTCATTTGTTTACCCACAATATATCCTGGATATATTGTCAGTGTCGGGTCTAATAAAGTC
GCAGGAGGAGTTCGAGAGAGAGATGAGAAAACTCGGGAAGCTGAGGCACAAGAATGTGGT
GGAGATAAAAGGGTACTACTGGACGCAATCGCTGCAGCTCTTGATCCACGAGTTTGTTTC
AGGCGGAAGCTTGTACAGACATCTCCACGGAGATGAGAGCGTTTGCCTAACTTGGCGTCA
ACGTTTCAGTATCATTCTAGGGATAGCAAGAGGTCTGGCTTTTCTGCATAGCAGTAACAT
CACTCACTACAACATGAAAGCAACGAATGTGCTCATTGACGCCGCAGGGGAGGCTAAAGT
CTCTGACTTTGGGCTGGCCAGACTGTTGGCTTCGGCGCTGGACAGGTGCGTCTTGAGTGG
CAAGGTACAGAGCGCGTTGGGGTACACAGCCCCGGAGTTTGCATGCCGGACAGTCAAGAT
AACCGACAGGTGCGATGTTTACGGGTTTGGGATCCTGGTGCTGGAGGTGGTGACAGGGAA
GAGACCCGTGGAGTACGCTGAGGACGACGTCGTGGTCTTGTGTGAGACGGTGAGAGAAGG
GTTAGAAGAAGGGAGGGTGGAGGAGTGCNTTGACCCTCGGTTGAGAGGGAATTTTCCAGC
GGAGGAGGCAATACCGGTGATTAAAC

Last Updated on 06.12.2018 16:11