Sequences from confirmation amplicon


Confirmation sequences for line SALK_074400c and hit At1g78610 are shown.
Line ID SALK_074400c
Locus At1g78610 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:29571442
Primers used for PCR 23ht - LBb3, show primer details
   
Sequence Name 80-K112669-SALK_074400C-23ht
GenBank Accession LN486219 [GenBank]
Sequencing primer gene specific primer, 23ht: 5'-CTTAGGTATGGACGAGCTTCAATC-3'
Sequence (A. th genome BLAST matches underlined)
>80-K112669-SALK_074400C-23ht
AAACGTGACCCCGTGGGAAGACGAGACAGTCGCAGTAATACCAACAATAACGATGATGGA
GAAGTTGTCAAGTGTAGTGGTAATAATGCTCCGATTCAGAGAAGCTCTAGCACTTTACTT
AAGATGAGAACTAGGTCACGTCTTTCGGATCCGCCAACGCCTCAGTTGCCGCCGCAAACG
GCGGATATGAAGTCGGGTCGGATTCCGAAATCCGGGCAGATGAAATCAGGTTTTTTTGGA
AAAAGCCCTAAGACTCAAGGTGAGGAAGAAGAAGATGATCCATTTGCAGCAGAGGATTTA
CCAGAAGAGTATAGGAAAGATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTT
TCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAG
TTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGT
TCCGAATCGGGCAAAA
   
Sequence Name 70-K112668-SALK_074400C-R210
GenBank Accession LN486005 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>70-K112668-SALK_074400C-R210
GTAATCCTCTGCTGCAATGGATCATCTTCTTCTTCCTCACCTTGAGTCTTAGGGCTTTTT
CCAAAAAAACCTGATTTCATCTGCCCGGATTTCGGAATCCGACCCGACTTCATATCCGCC
GTTTGCGGCGGCAACTGAGGCGTTGGCGGATCCGAAAGACGTGACCTAGTTCTCATCTTA
AGTAAAGTGCTAGAGCTTCTCTGAATCGGAGCATTATTACCACTACACTTGACAACTTCT
CCATCATCGTTATTGTTGGTATTACTGCGACTGTCTCGTCTTCCCACGGGGTCACGTTTT
GTAGAAACTCTCGGAGATTCCGATACCGGAGTTAAACCTCTAGATTGAAGCTCGTCCATA
CCTAA

Last Updated on 06.12.2018 16:11