Sequences from confirmation amplicon


Confirmation sequences for line SALK_145495 and hit At1g54170 are shown.
Line ID SALK_145495
Locus At1g54170 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:20222506
Primers used for PCR 17jd - LBb3, show primer details
   
Sequence Name 34-K113259-SALK_145495C-17jd
GenBank Accession LN485203 [GenBank]
Sequencing primer gene specific primer, 17jd: 5'-TTCGGACTAAGCTGTGTTGTATTG-3'
Sequence (A. th genome BLAST matches underlined)
>34-K113259-SALK_145495C-17jd
CTGCTCCGTCTGTCATTTTCACTTAGTGAATCAGAAACATAATAACAGAGACTTAAAGAG
TAATTTAGGCGTTGATCACTAGATAAAGAATAAAGAAAAGTTACTCCGTATCGAATATGT
AGTCCTGGCATGGGTGGAACAGGAGGATAATAGAATGATCCGTCAAAGACTGGAGATTGA
GGAGATTGAGGACGTGTTGCTGATGGAGATGGTTTGAAACTCTTTGCGTTAGGGTTCAGT
TTAAATTCCTGGTCGGACCTAATTTCGTTAGTAAAAAGCTTATAGTATTAAGGAGATATT
AGATGATAACCTAAGCACTAAGAAAAAAACCTTAGCATTTGGGTTGAGTGTGGATTTTTC
TGATGATAAAGAACCCGAAGAGCTTGGTGACAGTATTGGAAGATTTGATGCTGAGGAAGC
TGCAGAGTTTTCTGAATTTCTAGAAATGGAGCTTCCAGGCCACCCAGAAGAGTTCTCAGA
CTTTGCTCTGTCAGAGAGTAGACCGAGTCTTCCATCAATGAAACTTGGCTTCACAGGTGG
TGGTGCATCTTCATTGAGGTGGCAATTAAAAACTTAGTAGGAAATTCAATTGGTATCAAC
ATATAAGATGAAACGGGAGTAGATAGATTCGATAAGCTGAAGTTGCACATACCTTCAAAA
CCAGACACTGATTCCTCAGATGGCTGCGTTAATACAGATTGAAGCCAACAGAACAGTGTT
ATATGTAATGTTCCATTAAGCAAATGCCAAATCAACACAAGGTGCGTCGTTTAACTTTAT
ACCTTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGT
TTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGA
GAGTTGCAGCAAGCGGTCCA
   
Sequence Name 17-K113258w-SALK_145495C-R210
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>17-K113258w-SALK_145495C-R210
GTTAACGACGCACCTTGTGTTGATTTGGCATTTGCTTAATGGAACATTACATATAACACT
GTTCTGTTGGCTTCAATCTGTATTAACGCAGCCATCTGAGGAATCAGTGTCTGGTTTTGA
AGGTATGTGCAACTTCAGCTTATCGAATCTATCTACTCCCGTTTCATCTTATATGTTGAT
ACCAATTGAATTTCCTACTAAGTTTTTAATTGCCACCTCAATGAAGATGCACCACCACCT
GTGAAGCCAAGTTTCATTGATGGAAGACTCGGTCTACTCTCTGACAGAGCAAAGTCTGAG
AACTCTTCTGGGTGGCCTGGAAGCTCCATTTCTAGAAATTCAGAAAACTCTGCAGCTTCC
TCAGCATCAAATCTTCCAATACTGTCACCAAGCTCTTCGGGTTCTTTATCATCAGAAAAA
TCCACACTCAACCCAAATGCTAAGGTTTTTTTCTTAGTGCTTAGGTTATCATCTAATATC
TCCTTAATACTATAAGCTTTTTACTAACGAAATTAGGTCCGACCAGGAATTTAAACTGAA
CCCTAACGCAAAGAGTTTCAAACCATCTCCATCAGCAACACGTCCTCAATCTCCTCAATC
TCCAGTCTTTGACGGATCATTCTATTATCCTCCTGTTCCACCCATGCCAGGACTACATAT
TCGATACGGAGTAACTTTTCTTTATTCTTTATCTAGTGATCAACGCCTAAATTACTCTTT
AAGTCTCTGTTATTATGTTTCTGATTCACTAAGTTGAAAATTGACAGACGGGAGCAGCAT
TCCCTGGGCAACAACACCCAATGATGTATAACAATACAACA

Last Updated on 06.12.2018 16:11