SimpleSearch - Line and FST details


Line specific information

 
Line ID 550H05
Vector Used pAC161
Line Availability available as T3 set from NASC (N452793)
Segregation Analysis 50:19:15
Confirmed for Hit At1g20510
Parent of DUPLO pair none
Parent of pair(s) 5801, 5805, 5819, 5824, 10445, 10446

Gene hit At1g20510

 
Sequence (A. th genome BLAST matches underlined) 
>40-K020728-022-550-H05-8409
TGCACTCGACTCAACATTCTACAGCAAACGAACACCAATCCCACTCCCGCCAAATCCATC
ACTCGACGTCACTACTTTCATTTCTTCACAAGCTCATCGTGGCCGTATCGCCTTCATCGA
CGCTTCCACAGGTCAAAACCTCACCTTCACCGAGCTATGGCGTGCCGTGGAATCCGTCGC
CGATTGTCTCTCCGAGATAGGGATTCGCAAAGGCCACGTCGTCCTCCTCCTCTCCCCAAA
CTCAATTTTATTCCCCGTCGTTTGTCTCTCCGTCATGTCGCTATGGGATCCTCCCTATAG
TGAGACTATGGGATCCTCCCTATATTGGGCTACACTGAATTGGTAGCTCAAAGGGGTACT
TGAATTTGTTATCACTATGGGATCCCCCAAAGAAAAAAAGAAAGGGTATTTTCCAATTTT
TTTTCGATTCGAAAATGAAGCACGGCCACCGCGTTATTATTAAATGAAGGTCCTTTTTGA
TAAAACCACAA
GenBank Accession BX572464 [GenBank]
Graphic View Graphic view of gene At1g20510
Predicted Position of Insertion Chr1:7105816 - go to primer design
BLAST e Value 9e-152
Hit Clone Code (BAC ID) F5M15
Hit Gene Code At1g20510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation OPC-8:0 CoA ligase1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX547920 [GenBank] BX891562 [GenBank] BX891562 [GenBank] BX572465 [GenBank]


Last Updated on 10.06.2021 13:37