SimpleSearch - Line and FST details


Line specific information

 
Line ID 643A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N461637)
Segregation Analysis 50:48:47
Confirmed for Hit At1g20880
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g20880

 
Sequence (A. th genome BLAST matches underlined) 
>33-K022257-022-643-A05-8409
GNAGCCATTTAAATTGAATATATCCTAAGACTTGACCCGGTAAACCCTATGGGATCCTCC
CTATAGTGAGACTAAGTAATCCTCCCTATAGTGAGACTTGGTAATTCTATGGTTTCTGAT
CTATAGTGAGTCTGATTATTCTTGGTCTTTGGGATCCTCTCTATAGTGAGTGAAATTGTT
CTTACCTTTATTGATGGATTTGGAGATTAAATGTGTACCGGGATATTGTGAGGATAGGGA
TGTATGGTATTCGGGATTTTTGTTATTGTTTTATTTAGGGAGAAATGGGATTTTGAAAGT
ATGAAGGGAGGAGTAAAAGTATAATAGTTAATGGGGATGAAAATAAGGAATTGTCTACAT
AATGTGGTGAAAAGTACTGAGAAGATGGATCGGAGTTAAGTTATTGAGATATACGATAGT
AGAAACTAGATAAGTAATTAAAGAATATGACGGAGTAGAAAGAGAAGAAAGGGATAATAG
AGCTGAAAGAAAAAATAAGGTA
GenBank Accession BX659121 [GenBank]
Graphic View Graphic view of gene At1g20880
Predicted Position of Insertion Chr1:7264883 - go to primer design
BLAST e Value 9e-07
Hit Clone Code (BAC ID) F9H16
Hit Gene Code At1g20880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37