SimpleSearch - Line and FST details
Line specific information
| Line ID | 004G05 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N400365) |
| Segregation Analysis | 50:44:42 |
| Confirmed for Hit | At3g06330 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g05133
| Sequence (A. th genome BLAST matches underlined) | >39-K014807-022-004-G05-8409 TTGATCCATGTAGATTTCCCGGAATGAAGCCTTTACATTGAATTATCCTGTGCATCTAAC TGATGTTCACCGCGACTGTCTATAGCATATACGATTCTGTTTGTCTGGAGTATGGAAACC GGTAGGAGGACTAATGCTACTGCATCCCAACCTCTCCATACTGGACTAGATGCTTTATAC CTTCCTATAGAGGAAAGTGCTTATGATGATGATTGTCTA |
| GenBank Accession | FR799858 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:2645905 - go to primer design |
| BLAST e Value | 4e-04 |
| Hit Clone Code (BAC ID) | C17L7 |
| Hit Gene Code | At4g05133 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
Gene hit At3g06330
| Sequence (A. th genome BLAST matches underlined) | >39-K014797-022-004-G05-8409 NTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATTTAAGCTTGAAAA AGAAAGTTATTTCTCAACCCGAAAGCGAGAGAAGCTCCTTACTATCTCCTGGTCTCATGG AAACCGCTAAAAAGCCTAATGCTACTGGTTCCACAACTTCTCCATATTGGAAAAGATGCT TATCGCTTCCTATGGGATCCTCCTATAAAGTGAG |
| GenBank Accession | AL751523 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1918190 - go to primer design |
| BLAST e Value | 1e-78 |
| Hit Clone Code (BAC ID) | F28L1 |
| Hit Gene Code | At3g06330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |