SimpleSearch - Line and FST details


Line specific information

 
Line ID 822A07
Vector Used pAC106
Line Availability available as T3 set from NASC (N769358)
Segregation Analysis N/A (line seemingly not resistant, T2 plants grown without drug)
Confirmed for Hit At3g10910
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g49430

 
Sequence (A. th genome BLAST matches underlined) 
>49-K025507-022-822-A07-8409
CACCGGGCATGCACGCAACACCATCTCAAAATATTTGAACGCACGATATAGATCCTCCCT
ATTCTGAGACATCGCAAACTATTTGAACTCTCGTATGGTATCCTCCTTTTAATTAGGATT
TTTTTTTTATTGTATAAAGAAACTGATGCTGGCATTGTGCATGTGCTTTGTTCAATCCTG
ATTCTGTATTGAAATGTTTTGATTTAATTTGCGTTTGGATTCTTTGGTGATTAAAAATGG
GGCAATTCTAATTTAGGGTTTTTGTTTTTTTGAT
GenBank Accession CR360630 [GenBank]
Graphic View Graphic view of gene At5g49430
Predicted Position of Insertion Chr5:20046655 - go to primer design
BLAST e Value 4e-58
Hit Clone Code (BAC ID) K7J8
Hit Gene Code At5g49430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At3g10910

Sequence (A. th genome BLAST matches underlined) 
>49-K025530-022-822-A07-8409
AGCCATTTACAATTGAATATATCCTGAGAACACTCAAGACTTTGCTAATTTCTTACGTTT
TATTAGCTTAGCATAATTAGACTAATTGCTAGATACAGAGCCTAGTGAACACATCTTTGG
CGAAGGTCCATACACCATGTAAACAACCATGTCCTCGTCCCGCCGGCAAACAACCATCGG
CGAACGCTGCTCAAGGAGTAGCGATTGTCTACAAGTGGGGCAAGAGGAACGTGAGAGCAA
CCAAGTATCGATGCACCTCACGTGGAAGCCATGGTTACATTTAGGTAAAACCCTAACTTT
TTCTCCATCTTCGAAATCTCCCAGACAGATCAAACACTCCGTAGCTTTCATGTCTATGAT
TCCTGATCCGTATGGGATCCTCCCCATAGTGA
GenBank Accession CR360631 [GenBank]
Graphic View Graphic view of gene At3g10910
Predicted Position of Insertion Chr3:3412974 - go to primer design
BLAST e Value 6e-119
Hit Clone Code (BAC ID) T7M13
Hit Gene Code At3g10910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences