SimpleSearch - Line and FST details


Line specific information

 
Line ID 085E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N408124)
Segregation Analysis 50:25:16
Confirmed for Hit At3g15010
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g15010

 
Sequence (A. th genome BLAST matches underlined) 
>93-011846-strizhov-E12-35St
CTGACCGTAAGGGGATGACGCACAATCCCACTATCCTTCGCAAGACCCTTCCTCTATATA
AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGC
CTTCGGTTTAAACTATCAGTGTTTGATGGTAAAAAAAACATCGAGTTAGCTACTTAAGCT
TAGTGTGGTTATTCCAAGGGTATGGAGGATATATCGAGTTGTTGACTTGTTTAAATTATG
ACATTATTGTATCGTGAAAATCTCATGGCTTGTGATGTCGAGGTGTTGCTTCTCTGATCC
CAAGATGCTGAGTTTGTTTTTGTTTTTTGGGATTTGAGAAAATGATAATGTGTTCTTAGT
CTATGGTGGGGTCATTTATTTGTCACTTCGAAGACAGATTTTGATGCCCGAATAGCTCTT
CTTGCTTCTTTCTTGGTCACAAACAAAAGACAATTTGTCAATTTGTGTGTTTTAGGTGTA
GAAAAAGGCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCANNNNNNGAANAGNGGN
GGGACCGTTTTTTTTTTCCCCGGGGGACCCGGGGGGGGGGGGCCCCTTTGCGGGGGGGGC
CCTATAGGGAGGATCCCATAACCTTTTTCTACCCTAAAACCACAATTGGGCAAATTGCCC
TTTGGTTGGGACCGAGAAAGAGCAAGAAGAGCTTTTCGGCCTCAAAATCTGTCTTCGACG
GGCCAATAGTGACCCCCCTTAGCCCTAGACCATTTATCTTCTTTCACAAACAAACAA
GenBank Accession AL769350 [GenBank]
Graphic View Graphic view of gene At3g15010
Predicted Position of Insertion Chr3:5055226 - go to primer design
BLAST e Value 9e-150
Hit Clone Code (BAC ID) K15M2
Hit Gene Code At3g15010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL769349 [GenBank]


Last Updated on 10.06.2021 13:37