SimpleSearch - Line and FST details
Line specific information
| Line ID | 452D03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N443335) |
| Segregation Analysis | 50:32:31 |
| Confirmed for Hit | At4g13430 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g29032
| Sequence (A. th genome BLAST matches underlined) | >20-K018813-022-452-D03-8409 GCCTCCCTATAAAGAACCTAAAGGGGTTATAAATTCGTCTTTCTACTATAGTAGACAAAA AGTCTTACTATGACACATAAGCTGCGTTGACTGTGAGAGAGTCCCTATGGGATCCTCCCT ATAGTGAGACNCTANNNATCGNTTCNTTACCCCTCTTGTGGTCAAATACTAAACATGGGC GTTCGACGGACTGATAGAAACCCTACCCTATGGGATCCTCCCTATATCTAGATCCGCCTA TGGAATCCTCCCTAGAAACTACAGGATCGGTATAAGCTTCTTCTTCTTCTTCTTCTTTCT TTTTTTTTTGACCCTCCTTCACTGGTTTTGTGTGTTGGATTTTATCAGGTGAAAACTGGG ATGACAATGAAAGAGAATATTCTGGGCGGTCGCCTCTAGTCAGCCCCACAACACTCCACC AGCCTCATCATCGCCTTCTTCCTCTGGTCCAAATCCAACTCCCTCTCCCTCACCATTACC GCCCCCACCACTCCAAAATCAACACTCCATGCGAACCCGAGCCAAAAATAGCATAACCAC ACCTGTCAACAGGCTAACCC |
| GenBank Accession | BX292213 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:11018552 - go to primer design |
| BLAST e Value | 1e-53 |
| Hit Clone Code (BAC ID) | K5K13 |
| Hit Gene Code | At3g29032 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
Gene hit At4g13430
| Sequence (A. th genome BLAST matches underlined) | >20-K018811-022-452-D03-8409 TTTCTACTATAGTAGACAAAAAGTCTTACTATGACACATAAGCTGCGTTGACTGTGAGAG AGTCTCTATGGGATCCTCCCTATAGTGAGACGCAGAGTGATTTGGGGATTTCTTCGTTTC CTAAATCTTCTCAGATTTCGATTCATCGATGTCAGAAGAAATCGATCTCACGGAAGATTG TTTCCGTTATGGCTCCTCAAAAGGATCGGTCTCCTGGAACTACAGGATCGGTATAAGCTT CTTCTTCTTCTTCTTCTTTCTCTCTCGTTTGATTTTACTTCAATGGTTTTGTGTGTTGGA TTTTATCAGGTGAAAACTGGGATGACAATGACGGAGAAGATTCTAGCTATGGGATCCTCC CCTATAGTGAGANNNNNNNNNNNNNTNNNTGNNNNTTNTTTTTTNNGTGNTTTNNTTTTT CNCCCTCCTTNTTTATTTTGNNNGGNTGCTNNNTCTGGTCTGCNGGGTNTTTTTCGCCTG GTGGTTGGGTTGGCTCGCTGTTGCNCCGTGTTTTTTGTTTGTTTGGGCC |
| GenBank Accession | BX292212 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:7807801 - go to primer design |
| BLAST e Value | 1e-77 |
| Hit Clone Code (BAC ID) | T9E8 |
| Hit Gene Code | At4g13430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | isopropyl malate isomerase large subunit 1 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |