SimpleSearch - Line and FST details
Line specific information
| Line ID | 189B03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N418063) |
| Segregation Analysis | 50:46:44 |
| Confirmed for Hit | At5g05270 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit F23M19
| Sequence (A. th genome BLAST matches underlined) | >18-K014625-022-189-B03-8409 TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGATAAA AGGAGAAAAAGAAACCGGATATGCATGTCGACCCTATGGGATCCTCCCTATAGTGAGAGG NGNNCTNCANCAGNATTTTCCTGTCTTTTTTAGATGATAAAATGAGCTCAGTTCCCCTGT GCATTTGGACGGAATGTTTCTCAGGCTAAGCATCCAAGTTACCTTGTATTTGCAGGCCGA TTTCAACTGCCCGGCTCTAGATCATGCTCATTGGCCATCCAAGT |
| GenBank Accession | FR805391 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:12524652 - go to primer design |
| BLAST e Value | 7e-12 |
| Hit Clone Code (BAC ID) | F23M19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g05270
| Sequence (A. th genome BLAST matches underlined) | >01-K121887-0022-189-B03C-8409 CTCCATCTCCGCTGAAAATGTATAATAGTAAGCAGAGGAACCGGTTCAATTTCGTTGGAC ACGTACTTAACCAGATTAATTAAGTAAACCGGAGTTTAACCAGTTGAATCAAAGTAAACC AAAATAAGAAGCCAAACCAAATAATGTATTTATTGAACCACGTAGTCTCCATCTAAACCA GAGAACCCTAATTCAAATTTTGATTTGAAAACATGGACTAATTAAGATTACCGGAGGCAA GGGCGTCGAAGAAGTCATCATCGCCGGCGAGTTCTTTTCCGGTTTTGCCTTTCCAGTTAT CAAGATGTGTTTTAACATCTGAAGGATCTAAGTAAACTCCGATCGCAGTGAACTTCACTT GAAGAAAGTGGATCTCAATGTCTGTGATCCCTATAACAAGAATATGAACAATCCATATAA AATTATTGTTACCTGCGATTTTGTTATGTATCGCATTATAAGGTATCAGACATTAAGAAA GCAAAAAAGAAATAAAAACCTTGGCCCAGAAGAGAGAGTGGCTTGGAAGTGATGATCTGT GGAGGAAAAGGAACCTCGTGAACCATGACCATCTCTGTTCCCACTGTTTGATAAACAAGA ACACACAAATCTTAGGAAAAAAACAAAGCATTGAAAAAAAGACAATGAGAATAATTGAAA CTTGTTAGAACTGAAAATCTTACTTTAGTGGATAAACTTGTAATAAAAAAGAATGCAAAG AGTGTAAGACTTACTTTCTAATTTATATTATTTTGAATCTGAGAGTGAAGAAATTTATAA ATGGCTTGGTGTACTATTTTACGATCTTAGAGAAACAATATCGAAATTGTAAATGTGAAT ATCTCTCTCTATATAATAAGCCAGGGACTGGTGGTAGGTAACATAATTTTGCTAACGTTC AAAGCTTGTGATCTAAAAGACGACGTATTCTTTTTATGAATTTCATTTTTTGCTACAAAG CTTGTGATCTCAATTGTTTGT |
| GenBank Accession | LT615054 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:1564227 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | K18I23 |
| Hit Gene Code | At5g05270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Chalcone-flavanone isomerase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |