SimpleSearch - Line and FST details
Line specific information
| Line ID | 545D04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N452264) |
| Segregation Analysis | 50:28:18 |
| Confirmed for Hit | At5g13930 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g65790
| Sequence (A. th genome BLAST matches underlined) | >69-K022079-022-545-E09-8409 AGCCATTTACATTTGTCGGCAGTCGTCATAGATCAAACTGTCACAATTATTATCGTGGGT TGTTGTCACCCTTATCGACGCAACAACCTATGGGATCCTCCCTATAGTGAGACGAAGNAN TCNTCCCTTTGNTGGGGNNTGGGGAGTCGGTGTGTGAGGGTTTCTATAGAATGTGGAGAG AGCGTTGGGACCCTCCGAAAGGGGGGGCGAGGAGACTCTTTTAATGTGCGGGCCCCATGC TTAGATCCTATAACCCTTGAAAGTGGACTTTATATTTCCATGGGATCAATCCTTAAGATG CCTGCAGAAATATCTTAATAGGAGACACATTACGTCCCAATTGCTATGGAATCTAGCAGA AAAAGAGAAGGAGTGGAGATTCATTCTGTAGAAGAAAGGGTTCAC |
| GenBank Accession | BX650370 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:24471309 - go to primer design |
| BLAST e Value | 6e-05 |
| Hit Clone Code (BAC ID) | F1E22 |
| Hit Gene Code | At1g65790 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | receptor kinase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit At5g13930
| Sequence (A. th genome BLAST matches underlined) | >69-K022301-022-551-E09-8409 AGCCATTTACATTGAATATACCCAACAGATCAAACTCTAATAAACCCAAGTTGGTGTATA CTATAATGGTGATGGCTGGTGCTTCTTCTTTGGATGAGATCAGACAGGCTCAGAGAGCTG ATGGACCTGCAGGCATCTTGGCTATTGGCACTGCTAACCCTGAGAACCATGTGCTTCAGG CGGAGTATCCTGACTACTACTTCCGCATCACCAACAGTGAACACATGACCGACCTCAAGG AGAAGTTCAAGCGCATGTGTACGTCTTATTACCTTCTACTTTCATTTCCTTTGTAATATA TCTTCATTCAAGACAATTAGCTATCAAGTATTTACTATTCACAAACTACAAATCAACAAT TCGAAAATAT |
| GenBank Accession | FR811953 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:4488725 - go to primer design |
| BLAST e Value | 2e-154 |
| Hit Clone Code (BAC ID) | MAC12 |
| Hit Gene Code | At5g13930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Chalcone and stilbene synthase family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |