SimpleSearch - Line and FST details


Line specific information

 
Line ID 343D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N432875)
Segregation Analysis 100:87:72
Confirmed for Hit At5g44090
Parent of DUPLO pair none
Parent of pair(s) 3139, 6916, 97593, 97595

Gene hit At5g44090

 
Sequence (A. th genome BLAST matches underlined) 
>52-K016155-022-343-D07-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATAATCATTGGTAAACAAATCA
AAACAGCAGTGAAGAGCTGGGAAAAGAAAACAAAGAGACCTGTCTAAGGTACTTGCAACC
NTGGCTGCCTTAAAATATTATATATCGTGTGAGGCTACGTCCATTGCCAACATATGTCCA
TCAACCCAATACTTGATAAATGCATCCCTGCAGGAACCAAATATGGTGTATTTAAAAGAT
ACTATGGGATCCTCCCCTAAAGGGAGAGGATATGAATATGACGTAATGACATGTGTATGA
TTGAGTAGAACATCTCAAACAGATCCTGGATCTTAATAGCCTACGGACGGATTCGCTGAT
AGAAAACACTATGACGAATACTCATACTGACTTTAGCTACACCATGAAAGCTTTGAGAAG
CTATGGGATCCTCGCCTATAAGTGAGACNACTTCTCTTTTGATTTTTCTCTTCCGCGTGA
TCGCTTAAGACTGGAAGAAACCTCAAGACCGTTATTGCTTGGCGTGACTTAGAGACTTCT
GAACACATCTCATCATGTTGTATCCCACCTGATGGGATTGACCCCTAAAATACTACCACA
ACAA
GenBank Accession AL952441 [GenBank]
Graphic View Graphic view of gene At5g44090
Predicted Position of Insertion Chr5:17745734 - go to primer design
BLAST e Value 8e-104
Hit Clone Code (BAC ID) MRH10
Hit Gene Code At5g44090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-binding EF-hand family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37