SimpleSearch - Line and FST details
Line specific information
Line ID | 131D04 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N412520) |
Segregation Analysis | 137:122:94 |
Confirmed for Hit | At3g18040 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g18040
Sequence (A. th genome BLAST matches underlined) | >28-K013050-022-131-D04-35St AAACTGACGTAAGGGATGACGCTCAATCCACTATCCTTCGCAAGACCCTTCCTCTATATA AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGC CTTCGGTTTAAACTATCAGTGCATATTTCATTTACACCGCATTGGAGTTATATTACTCTG TGACAACCAACCTTATATACGTGATCTAAGATTGTATATTAAAAAGTAGTAAAACGCT |
GenBank Accession | CR356276 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr3:6175198 - go to primer design |
BLAST e Value | 1e-04 |
Hit Clone Code (BAC ID) | MRC8 |
Hit Gene Code | At3g18040 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | MAP kinase 9 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At2g36910
Sequence (A. th genome BLAST matches underlined) | >28-K012721-022-131-D04-8409 TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCATTG CTGATAATTCCACTATAGATAGTGCCATATTGATCAGCGTATATGATGGTTGACTTATTG TTTCTGGATTCATCGTGGGATTCACTGCTGGTGTGGCAACTATGGGATCCTCCCTATAGT GAGTCCATNTACTGAAAATACCACATGCCTCCAGTTGCTATGACGACGTTGGAACAACTT CTTTTTTCTCCACGATGCTCGTGGGGGGGGGGGGATCATTGGGAGCACCGCCGGCGGAAG AATCATCATCGACGACGGCCTCTTCTTAATCGTGATGATGGTATTAGGAGCCACCTCCTT TCTTCACCACTTTCTCCATAATAAGACGACTAACTGCTCAGCGAAGGACTACGAGGATGT CGCCTATTACCACCCTTTCGAAAATCACCTTAGCCCTTCTGTGGTCTGATACTACTTCTT CTATAGATAAGGAGGAGACCACCAGCGTGTGCTACACCATCATGACGAAGATTATTTTCT TGTC |
GenBank Accession | FR803843 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr2:15502856 - go to primer design |
BLAST e Value | 2e-09 |
Hit Clone Code (BAC ID) | T1J8 |
Hit Gene Code | At2g36910 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | ATP binding cassette subfamily B1 |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |