SimpleSearch - Line and FST details


Line specific information

 
Line ID 524H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N450298)
Segregation Analysis 50:49:36
Confirmed for Hit F13C5
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F13C5

 
Sequence (A. th genome BLAST matches underlined) 
>48-K020217-022-524-H06-8409
ACCAGATGTATGGTTTTGGGTTCTCGTGTACGTGCTATCCTTTCGAAATAGATCTTTTCA
ATCTTTTTCGACTGCTATGGGATGCTATCTAAACTGAGATATAGTGAGANCNNTTTTTCT
TACNAAATTTTGGTGTAAAATCTATGAAATTTTCATCAAATGTTGTTTTGAAGGTTTTAA
TTTAATAGAAAAACCGTTACTCGTGTACTAAGTTCACAAAGACATAGAATGTGTGCTATG
GGATCCTCCCTATAGTGAG
GenBank Accession BX536251 [GenBank]
Graphic View Graphic view of sequence BX536251 of line 524H06
Predicted Position of Insertion Chr4:10380557 - go to primer design
BLAST e Value 2e-60
Hit Clone Code (BAC ID) F13C5
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F15O4

 
Sequence (A. th genome BLAST matches underlined) 
>48-K020209-022-524-H06-8409
ATGTACAGTTTTGGGTTCCCAATGAACGTGCTATCCTCAGGAGAAAGACCTTTTCGACTT
TTTTCCCTACTATGGGAACCTCACTATATTGAGACTATGGGATCCTCCCTATAGTGAGAC
AAAGTAGAGCCTACACATCACCAAACCACCACAATGTCAAAATTATACAGTTTTGAGGTC
GAAACCATTTCAATGAGCATGAAGGAGACACAAACCAAACTATCAAGACTACCAAGACTC
TTGGAGTGAACCAACCCATGTGTACCATAGACTTATGTGCCTTTATTGAAGCATATCAAC
GCAACCGGAGTTGGAATGTGGTTGTTTCCCAATGGTTTTACCTATGGGATCCTCCCTATA
GTGAG
GenBank Accession BX536250 [GenBank]
Graphic View Graphic view of sequence BX536250 of line 524H06
Predicted Position of Insertion Chr1:13169709 - go to primer design
BLAST e Value 4e-117
Hit Clone Code (BAC ID) F15O4
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37