SimpleSearch - Line and FST details
Line specific information
| Line ID | 840D06 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N480586) |
| Segregation Analysis | N/A (line seemingly not resistant, T2 plants grown without drug) |
| Confirmed for Hit | At5g46580 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g46580
| Sequence (A. th genome BLAST matches underlined) | >16-K104847-0022-840-D06C-3144 CCTTGCAGACCCTTCCTCTGTATAGGAAGTTCATTTCATTTGCAGAGGACAGGGTACCCG GGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGAGGAAACAGACT CTTGGATTTAACCCAATTAAAGAAAGTATGAGTCTTTTGCCATTCTCTTAAGCTGTTTAG CACAAGCAATGCGTTATCTCTATTGGGTGGATGAGGAATCTCATCGAGAAGAGATAAAAA CTCAGACTTTTCAGTGAAAATAGAACTATTGAGCTTCAGAGCAAAAGCCCTAAGATCCTT GATTTGAGGATTGTAAGAGTAAGCAGAACGCTTTTGTCTCTGAAGTGAAAGAACTGACCT TTTGGGTCTTGTTGGATTGACCCAGACAGATTTCGGTTTAGACAAGATTTGAGTTTGCTC TTGTCTGAGTGTTGAAAC |
| GenBank Accession | HG969153 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:18899097 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F10E10 |
| Hit Gene Code | At5g46580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | pentatricopeptide (PPR) repeat-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |