SimpleSearch - Line and FST details


Line specific information

 
Line ID 002E04
Vector Used pAC106
Line Availability available as T3 set from NASC (N400148)
Segregation Analysis 50:4:4
Confirmed for Hit At4g14690
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g72710

 
Sequence (A. th genome BLAST matches underlined) 
>29-K027008-022-002-E04-8409
TTTATCTCTCTTATTATTCTTTTCTTTTTTTAGTTTTCTCCATGGAAAAATAATAATAAT
TGCGGAGTTGTTGGGCCGTATGGGATCCTCCCTATAGTGAGACTGTTTGCTCACCCCTCT
GTGGGTGGTGCCACTCTGGGCGTACGGGACCCTCCCTATCTTGAGGCCTATTGGTAATTA
CTCTTTCTTTATCTCCGTATTGAGCATCTTACTCGTTGCTGATCCATGAAGATTTCCCGG
AGATGATGCCCTTTATGTGTCGCAATAGGCGGTCGCGCTTGGAGAGCCGCCAGGGAGAAG
GACTGGCCGGGAGGGCCCAGGGAAGGAAAGAGAGGAGAAG
GenBank Accession FR799796 [GenBank]
Graphic View Graphic view of gene At1g72710
Predicted Position of Insertion Chr1:27372233 - go to primer design
BLAST e Value 1e-18
Hit Clone Code (BAC ID) F28P22
Hit Gene Code At1g72710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation casein kinase 1-like protein 2
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At4g14690

 
Sequence (A. th genome BLAST matches underlined) 
>29-K026819-022-002-E04-8409
CATTTATCTCTGCATATTATCTCTTTTCTTTTTTTAGTTTTCTCCAGTGGAAAAATAATG
GTAGTTGCGGAGTTGTTGGGCCGTATGGGATCCTCCCTATAGTGAGAGTGATTGCTCATA
TCTCTGACGGTGGTGTCGGGTGGCTCNAAGAACAACTGCGTTGTTGAGGTTGTTTTCGAT
GGNTCCGCTGTTTAGGGATCAANGGCTGAGGTNCNTTCATAAGGGTCCCTGACTTCTTAC
GCGGAGCTATGGACCGGTCGTTTTCCTATGGGCGGGGCTCGTGCGGAGGACTTCAAAGAA
TATGGAATCCTCCTGGGAGGGACGGGGAGATAAAAGAAGATGCGA
GenBank Accession CR394759 [GenBank]
Graphic View Graphic view of gene At4g14690
Predicted Position of Insertion Chr4:8418830 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g14690 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Chlorophyll A-B binding family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR394760 [GenBank] CR394759 [GenBank]


Last Updated on 10.06.2021 13:37