SimpleSearch - Line and FST details


Line specific information

 
Line ID 002E11
Vector Used pAC106
Line Availability available as T3 set from NASC (N400155)
Segregation Analysis 51:5:4
Confirmed for Hit At5g61480
Parent of DUPLO pair none
Parent of pair(s) 3272

Gene hit At5g61480

 
Sequence (A. th genome BLAST matches underlined) 
>85-K026784-022-002-E11-8409
GNAGCCATTTACAATTGAATATATCCTGAGTTCTCTGGTTCTCTGCCTCAAGAACTCGCG
GAATCTCTCAAACCTAGAGACTTTATTTCTATTCCAAAACGGTTTCACCGGTGAAATCCC
AGAGAGTTATAGCAACTTGAAATCCCTCAAGCTTCTCGATTTTTCGAGTAATCAGCTTTC
TGGTAGTATCCCATCAGGCTTCTCGACCTTGAAGAACCTCACATGGCTAAGCTTAATCAG
CAATAACCTCTCAGGTGAAGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACTCCT
TTTTGGTATCCCCCTTAAAGACAGCGCTGCGGACCTCCCCATATTGAATTTTAAAAAAAG
AAGAGGCGAGGTAATTTTTGTGAAAGAGAAGGAAAAAAAGAACGAAATCAATAGCNAGAA
GAGGGGGGGGGGGGATGGCAAAAAGATATTCTTCCCCCCCACAACANTAAGACAGGCATC
GAAAAAAAAAGAGGAGGGGGAAGGAACAAACACAGA
GenBank Accession CR394777 [GenBank]
Graphic View Graphic view of gene At5g61480
Predicted Position of Insertion Chr5:24727065 - go to primer design
BLAST e Value 4e-123
Hit Clone Code (BAC ID) MCI2
Hit Gene Code At5g61480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR394775 [GenBank] CR394776 [GenBank] AL751383 [GenBank]


Last Updated on 10.06.2021 13:37