SimpleSearch - Line and FST details


Line specific information

 
Line ID 002E12
Vector Used pAC106
Line Availability available as T3 set from NASC (N400156)
Segregation Analysis 50:2:2
Confirmed for Hit At4g02120 At2g25312
Parent of DUPLO pair none
Parent of pair(s) 85551, 85556, 85563, 85565, 85566

Gene hit At4g02120

 
Sequence (A. th genome BLAST matches underlined) 
>93-K026819-022-002-E12-8409
ATTGTGATTAAAAAATGCCTAATAATTTGCATGTAACCTTAAGTATGGGATCCTCCCTAT
AGTGAGACGTATTACTCACGCCTGTTTCGATTTCCCCTAAACGAAGTCTCTATATGCTCC
TCATAAGTGAGCCGATATCACTTTCAGTGTAACACCAAGTTCAATAAACTCATCTCTTTC
AGCGTTGCGACAGCACCTGATCTGGATAGCTGGAATAAGATGGCTGAAACTTTTGATAAC
TTGACAAATCATGTGAGTATTTACACTGACACATTTTCTTTTACAAGCCTTGACTTTTCT
TATTTCTGTTATGCACAGGTCCAAATTGCTATGGTTGGAAAGTATGGGATCCTCCCTATA
GTGAGACAAAT
GenBank Accession CR394784 [GenBank]
Graphic View Graphic view of gene At4g02120
Predicted Position of Insertion Chr4:942313 - go to primer design
BLAST e Value 1e-122
Hit Clone Code (BAC ID) T10M13
Hit Gene Code At4g02120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CTP synthase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR394783 [GenBank] CR394782 [GenBank]

Gene hit At2g25312

 
Sequence (A. th genome BLAST matches underlined) 
>93-K025789-022-002-E12-8409
ATTGTGATAAAAAATGCCTAATAATTTGCATGTAACCTTAGGTATGGGATCCTCCCTATA
GTGAGACCGATTACCCATCCCCTGAATCTCTTCAGGATAATCACATTTCATTATATGCCC
TCTCTTTTGTAGCACCATTCACTTTCCTTGTATGATTGCCTCCATACAATGCGGAATTTT
TCCCTGGGCGGTTGCGCAAGACCTGGATTTTTTTATCAACACCGTTCACCGAATTTGAAC
CCTTTGCAAAATCATTATTACCCTATCCATCCTC
GenBank Accession CR394781 [GenBank]
Graphic View Graphic view of gene At2g25312
Predicted Position of Insertion Chr2:10780075 - go to primer design
BLAST e Value 9e-10
Hit Clone Code (BAC ID) T22F11
Hit Gene Code At2g25312 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ECA1 gametogenesis related family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37