SimpleSearch - Line and FST details
Line specific information
| Line ID | 004D10 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N400334) |
| Segregation Analysis | 50:27:21 |
| Confirmed for Hit | At4g36350 At2g20490 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3871, 4201, 4217, 4242, 91263, 91271, 91274 |
Gene hit At4g36350
| Sequence (A. th genome BLAST matches underlined) | >76-K014797-022-004-D10-8409 NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGATTACAGTGGCAATGC TTAGAAACCAAAAACAAGTAAAATTTTGTTCATCCTCATATTTGATCTATGATCGTCGCT GCTTAAAAAGTTTTGAGTATGTTTCTTTCTGTTTTCTGATTAAACGTATGGGTGACAACG TTTTATATAGAACTTAAATTGAAGTTTTTTTTTTTTTGGAAAAAAAAAAAAAAAGGGGGG TTTTAAAAAAATTTCAAAAAAAAAAAGGATTTTTAAACCCTTGGGGG |
| GenBank Accession | AL751475 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:17175798 - go to primer design |
| BLAST e Value | 2e-83 |
| Hit Clone Code (BAC ID) | F23E13 |
| Hit Gene Code | At4g36350 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | purple acid phosphatase 25 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g20490
| Sequence (A. th genome BLAST matches underlined) | >76-K014807-022-004-D10-8409 AAACCTTTAAACCTATGTTTTGTGTTGTTCGCAGCCCGGTTCTCCCCTGATCCATAATAC TCAAAGGCATAGAGTATTGTTGAAAGAAGCGATATGGTGCTCTTACCGACCCATAACGCA CATCTTCAGTACTGATGAAGAAGCAAACCACTTGCCTGTGTTGGTTTTTGATGTTCCTTT TTAATTTGCTATGGGATCCTTCCATGAAAGTGAGTGACTTGAACCGTCTTTGTAATGTCT TCAAATAGTGTGAGTTAAGAGCAATTTTTACCTATCGACGACTTGCCTGCCACTTAAAGA TTAATTTACCTTAAGAAATAGAGAGTGCCCATGGATGCTGCTTTG |
| GenBank Accession | AL751476 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr2:8832591 - go to primer design |
| BLAST e Value | 3e-94 |
| Hit Clone Code (BAC ID) | T13C7 |
| Hit Gene Code | At2g20490 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nucleolar RNA-binding Nop10p family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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