SimpleSearch - Line and FST details


Line specific information

 
Line ID 005H01
Vector Used pAC106
Line Availability available as T3 set from NASC (N400469)
Segregation Analysis 50:41:28
Confirmed for Hit At5g01520
Parent of DUPLO pair none
Parent of pair(s) 93399, 93401

Gene hit At5g01520

 
Sequence (A. th genome BLAST matches underlined) 
>08-K014769-022-005-H01-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAACACCTATATATAAC
ACTGAGGTAATGGTCTTGCCTTGGCGTAACACATACGTTTCCTGCTGTTTTATTGCTACT
GGATCTTCAAGATCACAATGTTCTTGTCTGCCTGATATGTGATTCTCTGTTTTTTATTTA
TAGGCATATGTTGATGGGAAGACCACAATGTCGCTACATGAACGCAAAACTATGGGATCC
TACTTATAATGGAGATCTGTTAATCACTTATTCTCTCTTAATCTAAAGGTATAAGATTAG
ACCCGACGATATGTTTTTTTCTGACTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL751617 [GenBank]
Graphic View Graphic view of gene At5g01520
Predicted Position of Insertion Chr5:207578 - go to primer design
BLAST e Value 6e-83
Hit Clone Code (BAC ID) F7A7
Hit Gene Code At5g01520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL751616 [GenBank]


Last Updated on 10.06.2021 13:37