SimpleSearch - Line and FST details


Line specific information

 
Line ID 006E12
Vector Used pAC106
Line Availability available as T3 set from NASC (N400540)
Segregation Analysis 50:45:33
Confirmed for Hit At3g61510
Parent of DUPLO pair none
Parent of pair(s) 92306, 92311, 92315, 92320, 92323, 92324, 92325, 92326

Gene hit F18A5

 
Sequence (A. th genome BLAST matches underlined) 
>93-K014798-022-006-E12-8409
NTGATCCATGTAGAGTTTCCCGGACATGAANGCCTTTACAAGCCATTTTAGATTTCATGA
TTTTTTTTCGAAAATATACCACTATTTTGCCGTTATATGTTTCAATAAAAAGTTAATGGC
TGAGCTTCCGAGTGAGATAAGCGTGTCTATAAACAATTGTTTAAGCTTAAAACTCAAAAT
CTACGGATAGAGCATTTTTTTTTTTTTTTTTTGAAAAAACCAAAAAAAAAAAAAGGGTTG
TAAAAAAAAACCCCCGGGGGGCCTTGGGGATTCCCCTTTTAGGGGGGGNNAAAAAAAANG
GGCNNCCCCCCTTTTTTTTCAAAAAAAAAAGGGGG
GenBank Accession AL751691 [GenBank]
Graphic View Graphic view of sequence AL751691 of line 006E12
Predicted Position of Insertion Chr4:7929540 - go to primer design
BLAST e Value 5e-62
Hit Clone Code (BAC ID) F18A5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g61510

 
Sequence (A. th genome BLAST matches underlined) 
>93-K014808-022-006-E12-8409
NTTTTGATCCATGTAGCATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTAAT
TCAGAGATCATCCAAGAGATGTATTATGTTAACCGTGATCTGATTCTATCGTCTACAGTC
TTTCAAGGACATGGGTCTTCCCGGTTTCCGGGTTGGAGTGGTTTACTCTTACAACGATGT
TTGTTGTGTCCTGCGCAAAGAGGATGTCTAGTTTTGGATTGGTCTCGTCGCAAACCAAAG
TTTTCTATGGGATCCTCC
GenBank Accession AL751692 [GenBank]
Graphic View Graphic view of gene At3g61510
Predicted Position of Insertion Chr3:22764213 - go to primer design
BLAST e Value 3e-76
Hit Clone Code (BAC ID) F2A19
Hit Gene Code At3g61510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ACC synthase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37