SimpleSearch - Line and FST details


Line specific information

 
Line ID 007H08
Vector Used pAC106
Line Availability available as T3 set from NASC (N400668)
Segregation Analysis 50:45:44
Confirmed for Hit At4g01430
Parent of DUPLO pair none
Parent of pair(s) 3976, 9899, 11211, 88889, 88897

Gene hit At1g61250

 
Sequence (A. th genome BLAST matches underlined) 
>25-K016981w-022-007-H08T-8409
TTGCCACAATCTCGTAACATCAATAACAATGAAGCAATGGTCACGACCAAACAAAGAAAT
GGCTCCTATGGGATCCTCCTCTATAGTGAGATATAAGCTTGTCTTCAACGTTCGGCTAAT
CCTTGGTCCGTGCTAAGATCTTAGATCGATTTCTAAAGTCTTCGTCTTCTTCTTCTTCTG
ATAACTATGGGATCTTCCCTATAGCGAGATGATGTGTATCTCCTTTTGTACGTTCCATTC
CGGATCCTTTGGGAACCTAGTTTGCAAGGGTCACTGAATCATATTGAGTTCCTGACATGT
TCCTATAGCAGC
GenBank Accession AL935868 [GenBank]
Graphic View Graphic view of gene At1g61250
Predicted Position of Insertion Chr1:22585733 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) F11P17
Hit Gene Code At1g61250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation secretory carrier 3
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At4g01430

 
Sequence (A. th genome BLAST matches underlined) 
>64-K014809-022-007-H08-8409
AAAGTAATGGGAACCCTATTTTGCATAATGGGAGCATTGTTGTTGACATTTTACATGGGC
TCCACGAGTTATGCAGAATCCCTCAGTTCTCATGCCACAATCTGGTACACATCAACATCA
ATAAGCAATGGTCACGACCAAACAAAGAAATGGCTTTTATGGGATCCTCCCTTAAGTGAG
ANNNNANCNNGANNNNNNCNNNCNNNTNNNNNTTNAANNNNGCTATGATCTTATATCCAT
TTCTAAAGTCTTCCTCTTCTTCTTATTCTGATA
GenBank Accession AL751819 [GenBank]
Graphic View Graphic view of gene At4g01430
Predicted Position of Insertion Chr4:586630 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) F3D13
Hit Gene Code At4g01430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nodulin MtN21 /EamA-like transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL751819 [GenBank]


Last Updated on 10.06.2021 13:37