SimpleSearch - Line and FST details


Line specific information

 
Line ID 008F05
Vector Used pAC106
Line Availability available as T3 set from NASC (N400737)
Segregation Analysis 50:17:10
Confirmed for Hit At3g46120
Parent of DUPLO pair none
Parent of pair(s) 91268, 91274
Note

Gene hit At3g46120

 
Sequence (A. th genome BLAST matches underlined) 
>38-K014810-022-008-F05-8409
TTGATCCATGTAGCATTTCCCGCACATGAAGCCATTTACAACTTCTCATTATACAGGTTA
AGTAAAAATCAATGCTATGGGATCCTCC
GenBank Accession AL751897 [GenBank]
Graphic View Graphic view of gene At3g46120
Predicted Position of Insertion Chr3:16938819 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) F12M12
Hit Gene Code At3g46120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation purple acid phosphatase 19
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g28190

 
Sequence (A. th genome BLAST matches underlined) 
>38-K014800-022-008-F05-8409
NTGATCCATGTGGATTTCCCGGACATGANGCACTTTACCCTTGCTACTATCCTGGCGTCG
NTGACACTTATGGCTCCCGCGCCGCGCGCGTGGACCAGCGGCCCTATGGGCTCCTGGCGG
TAGTGAGAGAANTTTCCATTGAGAACTGAGCCATGTGCACCTTCCCTCTCTCTGCACATA
TATATNTTCGAGGAATACGAGAGATCACC
GenBank Accession FR799955 [GenBank]
Graphic View Graphic view of gene At5g28190
Predicted Position of Insertion Chr5:10169089 - go to primer design
BLAST e Value 4e-07
Hit Clone Code (BAC ID) T24G3
Hit Gene Code At5g28190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37