SimpleSearch - Line and FST details


Line specific information

 
Line ID 009H03
Vector Used pAC106
Line Availability available as T3 set from NASC (N400855)
Segregation Analysis 50:48:40
Confirmed for Hit At3g52900
Parent of DUPLO pair none
Parent of pair(s) 4401, 4448, 7327, 9994, 97093, 97098

Gene hit At1g22400

 
Sequence (A. th genome BLAST matches underlined) 
>24-K028791-022-009-H03-8409
TAGATAGGCACATGTGCCTTGGAAGATGAAGATATACTTGGAATTTGAAGAAGATCTGGT
GCCNCGGAAACCTATATATTTTGTTGCACGGG
GenBank Accession CR933999 [GenBank]
Graphic View Graphic view of gene At1g22400
Predicted Position of Insertion Chr1:7907137 - go to primer design
BLAST e Value 5e-30
Hit Clone Code (BAC ID) F12K8
Hit Gene Code At1g22400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-Glycosyltransferase superfamily protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At3g52900

 
Sequence (A. th genome BLAST matches underlined) 
>24-K014859-022-009-H03-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATGAAGAAGAAGAGATATGG
AAAGTTGCAGTGACGAGGTTTCAAGCCCGAGAAGAAGAGATCGAGAGGAAGAAGATGACT
GTTAAGGAAAAAGTTCAACAGCGGCTCGGTTTTGCAGAGGAAGCTACAAGATGCTTAACT
CAAACATTGGAAGTAAGTTTATAAAAAGCCTTTTGTGTAACATGGTAGACAACAAAGCTA
ATAATGTTCTTACTAAAACAGGAGCTATGGGATCCTCC
GenBank Accession AL751985 [GenBank]
Graphic View Graphic view of gene At3g52900
Predicted Position of Insertion Chr3:19613207 - go to primer design
BLAST e Value 4e-127
Hit Clone Code (BAC ID) F8J2
Hit Gene Code At3g52900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RAB6-interacting golgin (DUF662)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR799988 [GenBank] FR799988 [GenBank]


Last Updated on 10.06.2021 13:37