SimpleSearch - Line and FST details


Line specific information

 
Line ID 010C04
Vector Used pAC106
Line Availability available as T3 set from NASC (N400892)
Segregation Analysis 100:72:59
Confirmed for Hit At3g59260
Parent of DUPLO pair none
Parent of pair(s) 9663, 69763

Gene hit At3g59260

 
Sequence (A. th genome BLAST matches underlined) 
>29-K016930w-022-010-C04T-8409
TGATCTGTAGATTCCCGGACATGAAGCCATTTACATTGAATATACTCCTTTCTTCCTTAT
ATTGATTTCATTTACAATTGAATATACTCATTGCTCGATCCAAAAGCTCAAACCCACCAG
GCCGTTCCAGAGTCATGGACCGCCTTTGCCTACATTGTAGAAGGCGATGAAGGCGTTTTT
AGCTCCTCGGACTCTTCCACAGTACAAGCACATAATGTTGTGGTGTTTGGGACAGGGGAT
GAAGTTAGCGTGTGGAACACGTCAAACTCTATGGGAT
GenBank Accession BX890645 [GenBank]
Graphic View Graphic view of gene At3g59260
Predicted Position of Insertion Chr3:21904812 - go to primer design
BLAST e Value 1e-96
Hit Clone Code (BAC ID) F25L23
Hit Gene Code At3g59260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pirin
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX890644 [GenBank]

Gene hit At4g16008

 
Sequence (A. th genome BLAST matches underlined) 
>27-K014869-022-010-C04-8409
NTGATCCATGTAGATTNTCCCGGACATTGAAGCCTTTACAAAAGTGTTGGGCCCTTACTC
TCTTAATGCCCATACCATTTAACTTCAGGACGGACATACTATCGACGTTCACCTCTCAAC
GTTCGTCTTCGATGTTCCTGAGAAATGACACCGGATTCAGCATACACTGAGATGACGCAA
TGCAAGCGCTTGTACGCGTACACGACCTGTCTTTCAAACCAATTCTCATACCGTTGATGG
GTTATAGACAACAGGATGAAGACACCTGTA
GenBank Accession AL752011 [GenBank]
Graphic View Graphic view of gene At4g16008
Predicted Position of Insertion Chr4:9069009 - go to primer design
BLAST e Value 1e-13
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16008 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37