SimpleSearch - Line and FST details


Line specific information

 
Line ID 010E02
Vector Used pAC106
Line Availability available as T3 set from NASC (N400914)
Segregation Analysis 50:36:26
Confirmed for Hit At1g11940
Parent of DUPLO pair none
Parent of pair(s) 7992, 96102

Gene hit At1g11940

 
Sequence (A. th genome BLAST matches underlined) 
>13-K014861-022-010-E02-8409
NTGATCCATGTCGAATTTCCCGGACATGAAGCACTTTACATTTGAATATATCCTGCCAAA
CCATTTTATTCCTATTAATACTTGTCCGTTATTCTAAATTTCAAAAAAATTGCTGATTCT
GGTGATTTTGCAGGGAGTGGATCATGCGAATTTCTCAATTTATATACCTTCACTACCTGG
TTTCGTGTTCAATGAAGAAACTACACGATCACAGTATTTCTATAATCGCCAATTGAACAA
TAGCATTAAGGTGAGTGTTCATGAGAATTTCTCCATTTGATGTTTTTTTATAGTGAAACT
TAGGGTGGTGTTGTTATGGTTATAGGTAGTATGGGGAGAATCAAGCATGATTGAAGCAGA
AAGATTGGCGCTTGCATCTGCTTTAGAGGATCACTCCAATCAAAGATTTGTTCTTCTCTC
TGACAGGTTTGCTTCTTTGAGCATTACTCTTTCAGATCATCTTATGCCTGACCACTTATT
GCATCTGACTTTGAGCACATTGGTGGCTTGTACGGACTTATTTCATTATCATCTACTTTA
CTGTATGCAGATGTGCTCCATTATATGACTGATGCTATCTATGCAAATATCTTATCTCTT
CACCGATGAGCTATGTGGATAGGTAGACTGAAAGTCTGAATGTATGAGGTGGCTTAGCAC
TACATACTTGATATATATGGCCTGATAACTGGTGGATTATAAGAGGAGTTG
GenBank Accession AL752035 [GenBank]
Graphic View Graphic view of gene At1g11940
Predicted Position of Insertion Chr1:4033651 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F12F1
Hit Gene Code At1g11940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR799995 [GenBank]


Last Updated on 10.06.2021 13:37