SimpleSearch - Line and FST details


Line specific information

 
Line ID 011A07
Vector Used pAC106
Line Availability available as T3 set from NASC (N400967)
Segregation Analysis 100:80:75
Confirmed for Hit At5g22830 At5g19830
Parent of DUPLO pair none
Parent of pair(s) 94501

Gene hit At5g22830

 
Sequence (A. th genome BLAST matches underlined) 
>86-K016930w-022-011-A07T-8409
TGATATGTAGATTTCCCGGACATGTAGATTTCAGTGTCAGCTCTTTTATCCTATGCTCAG
TTCAAACTTAAACTTATAGCAAAAGGAAATGCTTTGTGTGTCGAAAATGGCAGTTTCATC
CTCTATAGCACGAATCCGTTCCTTTTAAGATCTAACTTAGTCATGGAGAAGTCCTAGGCT
ATGGGATCTCCCCCTATAGTGAGANNNNNNNNNNNNNNNNNTCCCCNTTTTTTTCTCAAT
NCAAAAGTGGCCGGCCGCACTCTAAAAATATAANCCNNNTCTNTTGCCTTGTTATCGCCT
GCTTGACCGTGCTCATGGCGGAACCACTTAGCGGCTGGTACAATGCCATTATGGGAACAT
CTTATAGTCTTTGTCTGCTAGCCTCG
GenBank Accession AL935955 [GenBank]
Graphic View Graphic view of gene At5g22830
Predicted Position of Insertion Chr5:7629237 - go to primer design
BLAST e Value 6e-74
Hit Clone Code (BAC ID) MRN17
Hit Gene Code At5g22830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation magnesium (Mg) transporter 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL752092 [GenBank] AL752091 [GenBank]

Gene hit At5g19830

 
Sequence (A. th genome BLAST matches underlined) 
>49-K013046-022-011-A07-35St
NNTTCAGACGTAAGGGACGACGCTCAATCCCCTATCCTTCGCAAGACCCTTCCTCTATAT
AAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCG
CCTTCGGTTTAAACTAGTATGTGTGGGACACTTGTAAGTTCTTGCTTTCACATACGCTCA
CTCAGGGTCCACGCCGTCTCAGCGAATCCTATGGGATTCTCCATATCGTGCTGCCGCACA
ACAAAACAAGAGCACACATCGAAACTATTTGAAAATCAACACAACCAGATCCTATGGGAT
TCTAACGCTTGAGAACCAAAAAGAACATTTGAGTACGTTGTGTCTAGTGCCTTCGTATTA
GTCACCTGGATTGCCCACTCCTA
GenBank Accession FR800019 [GenBank]
Graphic View Graphic view of gene At5g19830
Predicted Position of Insertion Chr5:6703674 - go to primer design
BLAST e Value 6e-43
Hit Clone Code (BAC ID) T29J13
Hit Gene Code At5g19830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peptidyl-tRNA hydrolase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR800018 [GenBank] FR800018 [GenBank]


Last Updated on 10.06.2021 13:37