SimpleSearch - Line and FST details


Line specific information

 
Line ID 013C08
Vector Used pAC106
Line Availability available as T3 set from NASC (N401184)
Segregation Analysis 50:45:42
Confirmed for Hit At1g19310
Parent of DUPLO pair none
Parent of pair(s) 12221

Gene hit At1g19310

 
Sequence (A. th genome BLAST matches underlined) 
>32-K011902-0022-013-C08-8409
TTGATCCTGTAGATTTCCCGGACATGAATCACTATTGCCATTACACTCCAATGTTTCCCA
TAAAGAGTTTACGTGCATGCGCACAGGCTACACGCGGACAGGCCACATCCGCATGTGTGT
TAAAGAACTCAGTTCCTATGGGATCCTCCCTATAGAGAGACCGTATTACTCATATCCGCT
CATGAGACAATATCCCTGATAAATTATTCTCATTGAATGTATCATTACCGCTATGGGATC
CTCCCTATAGTGAGTCGTATTACTTAGGNCCAAGTCCATTCCGGGTCTCGAAGTGCCTAA
CCGTCCATCGGGACAGAGACCCGAAACTGCACAACCTCCTGATCCTAACCATGGTTTTGC
TCATCATCATGGGTTTGGAGGGTTCATGGGAGGTTTTGCTGCTCCGATGGCGAGTGCGCC
GTTCGGGAATGTTACATTGTCTGCAGCGTTTGGCGGTTTGATTCCTTCTTTGTTCAACCT
CCATTTCCATGGTTTCCCTGATGCAGCCATGTATGGACCTGCTGCTTCTGGCGGCTTCCC
TCACGGTTTCTCGAATCCGTTTGATGGAGGACACTCACATATGCATAGTTACCAGCGGCA
CACGGGTCGACAAGGACAACAAGACCATCACTTGAGGATATTGATACTCATTGTTTTCGT
CGTTGGTGGGGTTTCTCTCTTGTGGAGCTAG
GenBank Accession FR800287 [GenBank]
Graphic View Graphic view of gene At1g19310
Predicted Position of Insertion Chr1:6677056 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F18O14
Hit Gene Code At1g19310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR394968 [GenBank] CR394968 [GenBank]


Last Updated on 10.06.2021 13:37