SimpleSearch - Line and FST details


Line specific information

 
Line ID 014E05
Vector Used pAC106
Line Availability available as T3 set from NASC (N401301)
Segregation Analysis 50:42:32
Confirmed for Hit At3g49110
Parent of DUPLO pair none
Parent of pair(s) 76004, 76114, 76425, 76629, 76682, 76714, 76720, 76724

Gene hit At3g49110

 
Sequence (A. th genome BLAST matches underlined) 
>37-K025982-022-014-E05-8409
TAGAAATGAACACTTATTTTTCCTACAAATTAACCGTTCAAACCCCACCTTTTTTTTTGG
ACTAACCCATAAGATAATGTGCCATGCCTCTTTATAAAGGATGGAATCCTCCCTATAGCG
AGACTGGATTACCTGACCCTACACTCAACACTACTTACCTCCAAACTCTTCGTGGTCAAT
GTCCTCGCAATGGTAATCAAAGCGTCTTAGTGGATTTCGATCTGCGTATGGGATCCTCCC
TATAGTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNANNCCTAGGGAACNCNCCCAAAN
NGGGANNGAGGNAAANANACNAANAANAANGNCCGANNAAGGGAAAGANGAAAACACGAG
CCCNAAAGAAGAAGCGCAAACAGCAGAAAAAGCGAAAGGCAC
GenBank Accession CR395066 [GenBank]
Graphic View Graphic view of gene At3g49110
Predicted Position of Insertion Chr3:18202294 - go to primer design
BLAST e Value 3e-53
Hit Clone Code (BAC ID) T2J13
Hit Gene Code At3g49110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation peroxidase CA
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR395066 [GenBank]


Last Updated on 10.06.2021 13:37