SimpleSearch - Line and FST details


Line specific information

 
Line ID 014G01
Vector Used pAC106
Line Availability available as T3 set from NASC (N401321)
Segregation Analysis 50:50:32
Confirmed for Hit At5g15380
Parent of DUPLO pair none
Parent of pair(s) 9498

Gene hit At5g15380

 
Sequence (A. th genome BLAST matches underlined) 
>73-K011903-0022-014-G01-8409
CTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTTATATACCTCTTCATCA
TCTGATGACAAGGAATAGAGATTATCATCATCATCATCATTAATGTGGATGTTCATGTCC
TCTGATTCACGTAATTTGTCAACCTCCTATGGGATCCTCCCTATAGTGAGTCGCATTACT
CATAATACGTGTTTGGGAACTGACTTAATGAACTAGACATACTCCTCCAAGAAGATAAAC
TCTACGTTGCGCGGATAAATTGGGCTATTGGAAGGAAGATGCGTGATATAACTATTGAGA
GAGGTGGTGAATCACCTACCTGACATATATAAACTATGGAACTCTCTGTATAAAGATGCA
AAAAGCTACATGCATTCCTCTCGCATAGATCCAATTAGCTATGGGATCCTCCCTATAGTG
AGTCGTATTACTCACCGCCGGTCCTCCCCCGGGGCCCCCTCTCCGCCCCCCGCCGCCGCC
CCCCCGCCGCCCGCGCCGCCCCGCCCCGCGCCCCCCCTTCTCTTCAACCCCTTCGCACAT
GGTTTCTTACTTACTTCCCTACGTTCTCCTCCCCCCCTCATCACCACCCTACTCCCCCTC
CCTCGCCCCCCACCAATCCGAGCCCCTCGCTCTCCTCACCCACAAAGAAACGTACACCAA
GTTCTTCTCATCCTACCCCTCCCCCTCCCCACCTCCTCCTCTGCCACCCTCTTTTCCCCA
CACCACCTCAAACTTCCTCTCATCCACCACTTCTTTTCCTCTCTCTCCCACCTC
GenBank Accession FR800385 [GenBank]
Graphic View Graphic view of gene At5g15380
Predicted Position of Insertion Chr5:4992309 - go to primer design
BLAST e Value 8e-24
Hit Clone Code (BAC ID) F8M21
Hit Gene Code At5g15380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation domains rearranged methylase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR395085 [GenBank] CR395084 [GenBank]


Last Updated on 10.06.2021 13:37